MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P7

Family name MIR-154 (all species)
Seed GUGACCU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P7  Cfa-Mir-154-P7  Cja-Mir-154-P7  Cpo-Mir-154-P7  Dno-Mir-154-P7  Eca-Mir-154-P7  Ete-Mir-154-P7  Hsa-Mir-154-P7  Mml-Mir-154-P7  Mmr-Mir-154-P7  Mmu-Mir-154-P7  Ocu-Mir-154-P7  Pab-Mir-154-P7  Rno-Mir-154-P7 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75558250-75558307 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCCUCAGCACGUACUUGGGUACAUUGAGAUGGUUGACCAGAGAGCACACGCUUUAUUUAUGACGUUUGUGACCUGGUCCACUAACCCUCAGUAUCUAAUCCCUCCUUGGAGGACUU
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Structure
        10          20        30          40        50         
UGGCCUCAGCACGUACU--|      AU    A--    U      AGAG    C  UUUAU 
                   UGGGUAC  UGAG   UGGU GACCAG    CACA GC     U
                   AUCUAUG  ACUC   AUCA CUGGUC    GUGU UG     U
UUCAGGAGGUUCCUCCCUA^      --    CCA    C      CA--    U  CAGUA 
      110       100          90        80          70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P7_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUGGUUGACCAGAGAGCACACGC -23
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Mature sequence

Laf-Mir-154-P7_3p (predicted)
mirBase accessionNone
Sequence 
38- UGUGACCUGGUCCACUAACC -58
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