| MirGeneDB ID | Laf-Mir-154-P30 |
|---|---|
| Family name | MIR-154 (all species) |
| Seed | AAUGUUG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-154-P1 Laf-Mir-154-P2 Laf-Mir-154-P3 Laf-Mir-154-P4 Laf-Mir-154-P5 Laf-Mir-154-P6a Laf-Mir-154-P6b Laf-Mir-154-P6c Laf-Mir-154-P7 Laf-Mir-154-P8 Laf-Mir-154-P9 Laf-Mir-154-P10 Laf-Mir-154-P11 Laf-Mir-154-P12 Laf-Mir-154-P15 Laf-Mir-154-P16 Laf-Mir-154-P17 Laf-Mir-154-P18 Laf-Mir-154-P19 Laf-Mir-154-P20 Laf-Mir-154-P21 Laf-Mir-154-P22 Laf-Mir-154-P23 Laf-Mir-154-P24 Laf-Mir-154-P25 Laf-Mir-154-P26 Laf-Mir-154-P27 Laf-Mir-154-P28 Laf-Mir-154-P29 Laf-Mir-154-P31 Laf-Mir-154-P32 Laf-Mir-154-P33 Laf-Mir-154-P34 |
| Orthologues | Bta-Mir-154-P30 Cfa-Mir-154-P30 Cja-Mir-154-P30 Cpo-Mir-154-P30 Dno-Mir-154-P30 Eca-Mir-154-P30 Ete-Mir-154-P30 Hsa-Mir-154-P30 Mml-Mir-154-P30 Mmr-Mir-154-P30 Mmu-Mir-154-P30 Ocu-Mir-154-P30 Pab-Mir-154-P30 Rno-Mir-154-P30 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010036.1: 75517046-75517099 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGUCCAAGCCUCUCUGUGGUACUCGGGGAGAGGUUACCCGAGCAACUUUGCAUCUGGACGACGAAUGUUGCUCGGUGAACCCCUUCUCGGUAUCAAAUUCCACCAGGGAGGCCGGet precursor sequence |
| Structure | 10 20 30 40 50 CGUCCAAGCCUCUCUGU---| U A AC - CAUCU GGUAC CGGGGAG GGUU CCGAGCAAC UUUG \ CUAUG GCUCUUC CCAA GGCUCGUUG AAGC G GCCGGAGGGACCACCUUAAA^ - C GU U AGCAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Laf-Mir-154-P30_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGUUACCCGAGCAACUUUGCAU -23
Get sequence
|
| Mature sequence | Laf-Mir-154-P30_3p |
| mirBase accession | None |
| Sequence |
32- GAAUGUUGCUCGGUGAACCCCU -54
Get sequence
|
