MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P33

Family name MIR-154 (all species)
Seed AUAUAAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P33  Cfa-Mir-154-P33  Cja-Mir-154-P33  Cpo-Mir-154-P33  Dno-Mir-154-P33  Eca-Mir-154-P33  Ete-Mir-154-P33  Hsa-Mir-154-P33  Mml-Mir-154-P33  Mmr-Mir-154-P33  Mmu-Mir-154-P33  Ocu-Mir-154-P33  Pab-Mir-154-P33  Rno-Mir-154-P33 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75516442-75516497 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUGGAGUCACGUUGGGUUCUUGAGGAGAGGCUGUCUGUGAUGAGUUCGCUUAAUCAAUGACGAAUAUAACACAGAUGGCCUGUUCUCAGUACCUCCUACCACUUGGGGUGUGU
Get precursor sequence
Structure
        10           20        30        40        50       
GGGCUGGAGUCACGUUG---|  UC       G            A  A     CUUAA 
                    GGU  UUGAGGA AGGCUGUCUGUG UG GUUCG     U
                    CCA  GACUCUU UCCGGUAGACAC AU UAAGC     C
UGUGUGGGGUUCACCAUCCU^  U-       G            A  A     AGUAA 
    110       100         90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P33_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCUGUCUGUGAUGAGUUCG -21
Get sequence
Mature sequence

Laf-Mir-154-P33_3p (predicted)
mirBase accessionNone
Sequence 
35- AAUAUAACACAGAUGGCCUGU -56
Get sequence