MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P11

Family name MIR-154 (all species)
Seed AACAUUC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P11  Cfa-Mir-154-P11  Cja-Mir-154-P11  Cpo-Mir-154-P11  Dno-Mir-154-P11  Eca-Mir-154-P11  Ete-Mir-154-P11  Hsa-Mir-154-P11  Mml-Mir-154-P11  Mmr-Mir-154-P11  Mmu-Mir-154-P11  Ocu-Mir-154-P11  Pab-Mir-154-P11  Rno-Mir-154-P11 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75552026-75552083 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUGCUCAUCGACUUGCGGUACUUAAUGAGAAGUUGCCCGUGUUUUUUUCGCUUAAUCUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUCCAAUUCUGCCUCGAGGAUGU
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Structure
        10          20        30         40        50        
CGUUGCUCAUCGACUUGC--|     U  U       U  -     UUUU     CUUAA 
                    GGUACU AA GAGAAGU GC CCGUG    UUUCG     U
                    CUAUGA UU UUCUUCA CG GGCGC    AAAGC     C
UGUAGGAGCUCCGUCUUAAC^     C  U       -  U     UUAC     AGUGU 
      110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P11_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAAGUUGCCCGUGUUUUUUUCG -22
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Mature sequence

Laf-Mir-154-P11_3p (predicted)
mirBase accessionNone
Sequence 
36- AAACAUUCGCGGUGCACUUCUU -58
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