MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-154-P11

Family name MIR-154 (all species)
Seed AACAUUC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues Ocu-Mir-154-P1  Ocu-Mir-154-P2-v1  Ocu-Mir-154-P2-v2  Ocu-Mir-154-P3-v1  Ocu-Mir-154-P3-v2  Ocu-Mir-154-P5  Ocu-Mir-154-P6a-v1  Ocu-Mir-154-P6a-v2  Ocu-Mir-154-P7  Ocu-Mir-154-P8-o1  Ocu-Mir-154-P12  Ocu-Mir-154-P14  Ocu-Mir-154-P17  Ocu-Mir-154-P18  Ocu-Mir-154-P19  Ocu-Mir-154-P20  Ocu-Mir-154-P21  Ocu-Mir-154-P23  Ocu-Mir-154-P24  Ocu-Mir-154-P25  Ocu-Mir-154-P26  Ocu-Mir-154-P28-v1  Ocu-Mir-154-P28-v2  Ocu-Mir-154-P29  Ocu-Mir-154-P30  Ocu-Mir-154-P32  Ocu-Mir-154-P33  Ocu-Mir-154-P34 
Orthologues Bta-Mir-154-P11  Cfa-Mir-154-P11  Cja-Mir-154-P11  Cpo-Mir-154-P11  Dno-Mir-154-P11  Eca-Mir-154-P11  Ete-Mir-154-P11  Hsa-Mir-154-P11  Laf-Mir-154-P11  Mml-Mir-154-P11  Mmr-Mir-154-P11  Mmu-Mir-154-P11  Pab-Mir-154-P11  Rno-Mir-154-P11 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 2043804821: 509-566 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGAUGGCGCUGACGUGCGGUGCUUAAUGAGAAGUCGCCCGUGUUUUUUUCGCUGUAUUUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUCCUACUCUGCCUCGGCGACGU
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Structure
        10          20        30         40        50        
CGGAUGGCGCUGACGUGC--|     U  U       C  -     UUUU     CUGUA 
                    GGUGCU AA GAGAAGU GC CCGUG    UUUCG     U
                    CUAUGA UU UUCUUCA CG GGCGC    AAAGC     U
UGCAGCGGCUCCGUCUCAUC^     C  U       -  U     UUAC     AGUGU 
      110       100        90         80        70        60
Deep sequencing
CommentNot in assembly but in trace archive.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-154-P11_5p*
mirBase accessionNone
Sequence 
0- GAAGUCGCCCGUGUUUUUUUCG -22
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Mature sequence

Ocu-Mir-154-P11_3p
mirBase accessionNone
Sequence 
36- AAACAUUCGCGGUGCACUUCUU -58
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