MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P32

Family name MIR-154 (all species)
Seed GAUCGAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P32  Cfa-Mir-154-P32  Cja-Mir-154-P32  Cpo-Mir-154-P32  Dno-Mir-154-P32  Eca-Mir-154-P32  Ete-Mir-154-P32  Hsa-Mir-154-P32  Mml-Mir-154-P32  Mmr-Mir-154-P32  Mmu-Mir-154-P32  Ocu-Mir-154-P32  Pab-Mir-154-P32  Rno-Mir-154-P32 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75516745-75516800 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUCACGCCUUUCCUGGUACCUGAAGGGAGAUCGACCGUGUUAUAUUCGCUUUCUUCACUUCGAAUAAUACAUGGUUGAUCUUUCCUCAGUAUCAAAUCUCACCUUGGAGGGCU
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Structure
        10           20        30        40        50       
CAGCUCACGCCUUUCCU---|    C   A GG             UA      CUUUC 
                    GGUAC UGA G  AGAUCGACCGUGU  UAUUCG     U
                    CUAUG ACU C  UCUAGUUGGUACA  AUAAGC     U
UCGGGAGGUUCCACUCUAAA^    -   C UU             UA      UUCAC 
    110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P32_5p
mirBase accessionNone
Sequence 
0- AGAUCGACCGUGUUAUAUUCG -21
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Co-mature sequence

Laf-Mir-154-P32_3p
mirBase accessionNone
Sequence 
35- AAUAAUACAUGGUUGAUCUUU -56
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