MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P19

Family name MIR-154 (all species)
Seed UCAUACA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P19  Cfa-Mir-154-P19  Cja-Mir-154-P19  Cpo-Mir-154-P19  Dno-Mir-154-P19  Eca-Mir-154-P19-v1  Eca-Mir-154-P19-v2  Ete-Mir-154-P19  Hsa-Mir-154-P19  Mml-Mir-154-P19  Mmu-Mir-154-P19  Ocu-Mir-154-P19  Pab-Mir-154-P19  Rno-Mir-154-P19 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75537069-75537132 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCAGUCAGUGCUGCUGUUUCAUACCCGAGGACAAAUUAUCCGUGGUGUGUUGCCUUUAUUCACGUUCAAUCAUACAAGGACAGUUGCUUUUUGAGUAUCAAAUCCUGCCUAGGUGGACUUCC
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Structure
        10          20        30        40        50         60 
UUCCAGUCAGUGCUGCU--|   C    C      CA    A   GUG     -   CCUUUA 
                   GUUU AUAC CGAGGA  AAUU UCC   GUGUG UUG      U
                   UAAA UAUG GUUUUU  UUGA AGG   CAUAC AAC      U
CCUUCAGGUGGAUCCGUCC^   C    A      CG    C   AA-     U   UUGCAC 
  120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P19_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGACAAAUUAUCCGUGGUGUGUUG -24
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Mature sequence

Laf-Mir-154-P19_3p (predicted)
mirBase accessionNone
Sequence 
40- AUCAUACAAGGACAGUUGCUUUUU -64
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