MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-154-P19

Family name MIR-154 (all species)
Seed UCAUACA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-539
Paralogues Hsa-Mir-154-P1  Hsa-Mir-154-P2-v1  Hsa-Mir-154-P2-v2  Hsa-Mir-154-P3-v1  Hsa-Mir-154-P3-v2  Hsa-Mir-154-P4  Hsa-Mir-154-P5  Hsa-Mir-154-P6a-v1  Hsa-Mir-154-P6a-v2  Hsa-Mir-154-P6b  Hsa-Mir-154-P7  Hsa-Mir-154-P8a  Hsa-Mir-154-P8b  Hsa-Mir-154-P9  Hsa-Mir-154-P10  Hsa-Mir-154-P11  Hsa-Mir-154-P12  Hsa-Mir-154-P14  Hsa-Mir-154-P16a  Hsa-Mir-154-P16b  Hsa-Mir-154-P17  Hsa-Mir-154-P18  Hsa-Mir-154-P20  Hsa-Mir-154-P21  Hsa-Mir-154-P23  Hsa-Mir-154-P24  Hsa-Mir-154-P25  Hsa-Mir-154-P26  Hsa-Mir-154-P28-v1  Hsa-Mir-154-P28-v2  Hsa-Mir-154-P29  Hsa-Mir-154-P30  Hsa-Mir-154-P31  Hsa-Mir-154-P32  Hsa-Mir-154-P33  Hsa-Mir-154-P34 
Orthologues Bta-Mir-154-P19  Cfa-Mir-154-P19  Cja-Mir-154-P19  Cpo-Mir-154-P19  Dno-Mir-154-P19  Eca-Mir-154-P19-v1  Eca-Mir-154-P19-v2  Ete-Mir-154-P19  Laf-Mir-154-P19  Mml-Mir-154-P19  Mmu-Mir-154-P19  Ocu-Mir-154-P19  Pab-Mir-154-P19  Rno-Mir-154-P19 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr14: 101047329-101047392 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P19)		 Mir-154-P1 chr14: 101022071-101022129 [+] UCSC Ensembl
Mir-154-P2-v2 chr14: 101023339-101023396 [+] UCSC Ensembl
Mir-154-P2-v1 chr14: 101023340-101023395 [+] UCSC Ensembl
Mir-154-P3-v1 chr14: 101023799-101023853 [+] UCSC Ensembl
Mir-154-P3-v2 chr14: 101023800-101023852 [+] UCSC Ensembl
Mir-154-P4 chr14: 101025020-101025076 [+] UCSC Ensembl
Mir-154-P5 chr14: 101025585-101025640 [+] UCSC Ensembl
Mir-154-P6a-v1 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P6a-v2 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P7 chr14: 101026035-101026092 [+] UCSC Ensembl
Mir-154-P8a chr14: 101026796-101026855 [+] UCSC Ensembl
Mir-154-P8b chr14: 101027113-101027172 [+] UCSC Ensembl
Mir-154-P9 chr14: 101029648-101029703 [+] UCSC Ensembl
Mir-154-P10 chr14: 101030064-101030120 [+] UCSC Ensembl
Mir-154-P11 chr14: 101031997-101032054 [+] UCSC Ensembl
Mir-154-P12 chr14: 101033768-101033825 [+] UCSC Ensembl
Mir-376-P2 chr14: 101039695-101039752 [+] UCSC Ensembl
Mir-376-P3 chr14: 101040081-101040138 [+] UCSC Ensembl
Mir-154-P14 chr14: 101040234-101040289 [+] UCSC Ensembl
Mir-376-P4 chr14: 101040460-101040517 [+] UCSC Ensembl
Mir-376-P5 chr14: 101040788-101040845 [+] UCSC Ensembl
Mir-154-P16a chr14: 101042991-101043050 [+] UCSC Ensembl
Mir-154-P16b chr14: 101044212-101044271 [+] UCSC Ensembl
Mir-154-P17 chr14: 101045927-101045989 [+] UCSC Ensembl
Mir-154-P18 chr14: 101046469-101046526 [+] UCSC Ensembl
Mir-154-P19 chr14: 101047329-101047392 [+] UCSC Ensembl
Mir-154-P20 chr14: 101047911-101047969 [+] UCSC Ensembl
Mir-544 chr14: 101048676-101048732 [+] UCSC Ensembl
Mir-154-P21 chr14: 101049572-101049631 [+] UCSC Ensembl
Mir-154-P23 chr14: 101052458-101052515 [+] UCSC Ensembl
Mir-154-P24 chr14: 101054316-101054373 [+] UCSC Ensembl
Mir-134 chr14: 101054694-101054754 [+] UCSC Ensembl
Mir-154-P25 chr14: 101055427-101055485 [+] UCSC Ensembl
Mir-154-P6b chr14: 101056233-101056289 [+] UCSC Ensembl
Mir-154-P26 chr14: 101059769-101059826 [+] UCSC Ensembl
Mir-154-P28-v2 chr14: 101060595-101060650 [+] UCSC Ensembl
Mir-154-P28-v1 chr14: 101060596-101060649 [+] UCSC Ensembl
Mir-154-P29 chr14: 101062056-101062115 [+] UCSC Ensembl
Mir-541 chr14: 101064504-101064569 [+] UCSC Ensembl
Mir-154-P30 chr14: 101065314-101065367 [+] UCSC Ensembl
Mir-154-P31 chr14: 101065465-101065519 [+] UCSC Ensembl
Mir-154-P32 chr14: 101065606-101065661 [+] UCSC Ensembl
Mir-154-P33 chr14: 101065925-101065981 [+] UCSC Ensembl
Mir-154-P34 chr14: 101066731-101066786 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUGGUCCGUGCUGCUGUUUCAUACUUGAGGAGAAAUUAUCCUUGGUGUGUUCGCUUUAUUUAUGAUGAAUCAUACAAGGACAAUUUCUUUUUGAGUAUCAAAUCUUGCCUCGGCAGACUUCC
Get precursor sequence
Structure
        10          20        30        40        50         60 
UGGUGGUCCGUGCUGCU--|   C     UG          A      G    -   GCUUUA 
                   GUUU AUACU  AGGAGAAAUU UCCUUG UGUG UUC      U
                   UAAA UAUGA  UUUUCUUUAA AGGAAC AUAC AAG      U
CCUUCAGACGGCUCCGUUC^   C     GU          C      -    U   UAGUAU 
  120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-154-P19_5p*
mirBase accessionMIMAT0003163
Sequence 
0- GGAGAAAUUAUCCUUGGUGUGUUC -24
Get sequence
Proposed targets microrna.org: MIMAT0003163
TargetScanVert: hsa-miR-539-5p
TargetMiner: hsa-miR-539-5p
miRDB: MIMAT0003163
Mature sequence

Hsa-Mir-154-P19_3p
mirBase accessionMIMAT0022705
Sequence 
40- AUCAUACAAGGACAAUUUCUUUUU -64
Get sequence
Proposed targets TargetScanVert: hsa-miR-539-3p
TargetMiner: hsa-miR-539-3p
miRDB: MIMAT0022705