MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P18

Family name MIR-154 (all species)
Seed AUCGUAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P18  Cfa-Mir-154-P18  Cja-Mir-154-P18  Cpo-Mir-154-P18  Dno-Mir-154-P18  Eca-Mir-154-P18  Ete-Mir-154-P18  Hsa-Mir-154-P18  Mml-Mir-154-P18  Mmr-Mir-154-P18  Mmu-Mir-154-P18  Ocu-Mir-154-P18  Pab-Mir-154-P18  Rno-Mir-154-P18 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75537837-75537894 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUCCGUGCUAAUCUUUGGUACUUGAAGAGUGGUUAUCCCUGUCCUGUUCGUUUUACUCAUGUCGAAUCGUACAGGGUCAUCCACUUUUUCAGUAUCAAGAACGCAGACUCUGGAGC
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Structure
        10          20        30        40        50        
UUUUCCGUGCUAAUCUU--|      U         UUAU      CCU     UUUUA 
                   UGGUACU GAAGAGUGG    CCCUGU   GUUCG     C
                   ACUAUGA UUUUUCACC    GGGACA   UAAGC     U
CGAGGUCUCAGACGCAAGA^      C         UACU      UGC     UGUAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P18_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGGUUAUCCCUGUCCUGUUCG -22
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Mature sequence

Laf-Mir-154-P18_3p (predicted)
mirBase accessionNone
Sequence 
36- AAUCGUACAGGGUCAUCCACUU -58
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