MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P16

Family name MIR-154 (all species)
Seed UAUACAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P16  Cfa-Mir-154-P16  Cja-Mir-154-P16a  Cja-Mir-154-P16b  Cpo-Mir-154-P16  Dno-Mir-154-P16c  Dno-Mir-154-P16d  Eca-Mir-154-P16  Ete-Mir-154-P16  Hsa-Mir-154-P16a  Hsa-Mir-154-P16b  Mml-Mir-154-P16a  Mml-Mir-154-P16b  Mmr-Mir-154-P16  Pab-Mir-154-P16a  Pab-Mir-154-P16b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75541362-75541421 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCACUGGGGCUGCUCUUUGGUACUUGAAGAGAGGAUACCCUUUGUAUGUUCACUCUAUUCAUGAUGAAUAUACAGAGGGAGACUCUUAUUUGCGUAUCAAACUCUGUCUGGCAUGUUGC
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Structure
        10          20         30        40        50         
CUCACUGGGGCUGCUCU--       U    -|    GAUA              ACUCUA 
                   UUGGUAC UGAA GAGAG    CCCUUUGUAUGUUC      U
                   AACUAUG GUUU UUCUC    GGGAGACAUAUAAG      U
CGUUGUACGGUCUGUCUCA       C    A^    AGA-              UAGUAC 
.       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Star sequence

Laf-Mir-154-P16_5p*
mirBase accessionNone
Sequence 
0- AGAGGAUACCCUUUGUAUGUUC -22
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Mature sequence

Laf-Mir-154-P16_3p (predicted)
mirBase accessionNone
Sequence 
38- AUAUACAGAGGGAGACUCUUAU -60
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