MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P1

Family name MIR-154 (all species)
Seed GGUAGAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P1  Cfa-Mir-154-P1  Cja-Mir-154-P1  Cpo-Mir-154-P1  Dno-Mir-154-P1  Eca-Mir-154-P1  Ete-Mir-154-P1  Hsa-Mir-154-P1  Mml-Mir-154-P1  Mmr-Mir-154-P1  Mmu-Mir-154-P1  Ocu-Mir-154-P1  Pab-Mir-154-P1  Rno-Mir-154-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75562213-75562271 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCAGCACCACUCCAUGGUUCCUGAAGAGAUGGUAGACUAUGGAACGUAGGCUUUAUGAUUUCUGACCUAUGUAACAUGGUCCACUAACUCUCAGUAUCCAAUCCAUCCACGGAGGGCA
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Structure
        10        20           30        40        50         
GUCAGCACCACUCCAUGGUUC---|   A   A    A       GA       CUUUAUG 
                        CUGA GAG UGGU GACUAUG  ACGUAGG       \
                        GACU CUC AUCA CUGGUAC  UGUAUCC       A
ACGGGAGGCACCUACCUAACCUAU^   -   A    C       AA       AGUCUUU 
       110       100         90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P1_5p (predicted)
mirBase accessionNone
Sequence 
0- UGGUAGACUAUGGAACGUAGG -21
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Star sequence

Laf-Mir-154-P1_3p* (predicted)
mirBase accessionNone
Sequence 
39- AUGUAACAUGGUCCACUAAC -59
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