MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P29

Family name MIR-154 (all species)
Seed UCACACA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P29  Cfa-Mir-154-P29  Cja-Mir-154-P29  Cpo-Mir-154-P29  Dno-Mir-154-P29  Eca-Mir-154-P29  Ete-Mir-154-P29  Hsa-Mir-154-P29  Mml-Mir-154-P29  Mmr-Mir-154-P29  Mmu-Mir-154-P29  Ocu-Mir-154-P29  Pab-Mir-154-P29  Rno-Mir-154-P29 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75519883-75519942 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGCCCGUGCUGACGUUUGAUCCCUGAGCAGAGGUUGCCCUUGGUGAAUUCGCUUUAUUUAUGUUGAAUCACACAAAGGCAACUUUUGUUUGAGCAUCAAAUCCUGCCUGGAAUGGCUU
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Structure
        10          20        30        40         50         
CUUGCCCGUGCUGACGU--     CCC               C   -|   A   GCUUUA 
                   UUGAU   UGAGCAGAGGUUGCC UUG GUGA UUC      U
                   AACUA   GUUUGUUUUCAACGG AAC CACU AAG      U
UUCGGUAAGGUCCGUCCUA     CGA               A   A^   -   UUGUAU 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P29_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGAGGUUGCCCUUGGUGAAUUC -22
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Mature sequence

Laf-Mir-154-P29_3p
mirBase accessionNone
Sequence 
38- AUCACACAAAGGCAACUUUUGU -60
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