MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-154-P24

Family name MIR-154 (all species)
Seed AAGUUGU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-154-P1  Pab-Mir-154-P2-v1  Pab-Mir-154-P2-v2  Pab-Mir-154-P3-v1  Pab-Mir-154-P3-v2  Pab-Mir-154-P4  Pab-Mir-154-P5  Pab-Mir-154-P6a-v1  Pab-Mir-154-P6a-v2  Pab-Mir-154-P6b  Pab-Mir-154-P7  Pab-Mir-154-P8a  Pab-Mir-154-P8b  Pab-Mir-154-P9  Pab-Mir-154-P10  Pab-Mir-154-P11  Pab-Mir-154-P12  Pab-Mir-154-P14  Pab-Mir-154-P16a  Pab-Mir-154-P16b  Pab-Mir-154-P17  Pab-Mir-154-P18  Pab-Mir-154-P19  Pab-Mir-154-P20  Pab-Mir-154-P21  Pab-Mir-154-P23  Pab-Mir-154-P25  Pab-Mir-154-P26  Pab-Mir-154-P28  Pab-Mir-154-P29  Pab-Mir-154-P30  Pab-Mir-154-P31  Pab-Mir-154-P32  Pab-Mir-154-P33  Pab-Mir-154-P34 
Orthologues Bta-Mir-154-P24  Cfa-Mir-154-P24  Cja-Mir-154-P24  Cpo-Mir-154-P24  Dno-Mir-154-P24  Eca-Mir-154-P24  Ete-Mir-154-P24  Hsa-Mir-154-P24  Laf-Mir-154-P24  Mml-Mir-154-P24  Mmr-Mir-154-P24  Mmu-Mir-154-P24  Ocu-Mir-154-P24  Rno-Mir-154-P24 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105486315-105486372 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUCUCUGCUUUUCUGUGGUACUUGAAGAGAAGUUGUUCGUGGUGGAUUCGCUUUACUUAUGACGAAUCAUUCACGGACAACACUUUUUUCAGUACCAAAUGCUACCUCUAAGGACU
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Structure
        10          20        30         40        50        
UUGUCUCUGCUUUUCUG--|      U       A-           UG      CUUUA 
                   UGGUACU GAAGAGA  GUUGUUCGUGG  GAUUCG     C
                   ACCAUGA CUUUUUU  CAACAGGCACU  CUAAGC     U
UCAGGAAUCUCCAUCGUAA^      -       CA           UA      AGUAU 
      110       100         90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Mature sequence

Pab-Mir-154-P24_5p
mirBase accessionNone
Sequence 
0- GAAGUUGUUCGUGGUGGAUUCG -22
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Co-mature sequence

Pab-Mir-154-P24_3p
mirBase accessionNone
Sequence 
36- AAUCAUUCACGGACAACACUUU -58
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