MirGeneDB 3.0

36 Pongo abelii microRNA genes of family MIR-154 (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Br Br Li Li
Pab-Mir-154-P1 None MIR-154 GGUAGAC None None CM054694.2 105453044 105453102 + Eutheria Eutheria No 1
Pab-Mir-154-P2-v1 None MIR-154 AGUAGAC None None CM054694.2 105454313 105454368 + Eutheria Eutheria No 1
Pab-Mir-154-P2-v2 None MIR-154 UAGUAGA None None CM054694.2 105454312 105454369 + Eutheria Eutheria No 1 1
Pab-Mir-154-P3-v1 None MIR-154 AUGUGGG None None CM054694.2 105454769 105454823 + Eutheria Eutheria No
Pab-Mir-154-P3-v2 None MIR-154 GGUUUAC None None CM054694.2 105454770 105454822 + Eutheria Eutheria No 1
Pab-Mir-154-P4 None MIR-154 AUGUAAU None None CM054694.2 105455995 105456051 + Eutheria Eutheria Unknown
Pab-Mir-154-P5 None MIR-154 AGGACAC None None CM054694.2 105456559 105456614 + Eutheria Eutheria No 1
Pab-Mir-154-P6a-v1 None MIR-154 ACAUUAC None None CM054694.2 105456721 105456776 + Eutheria Eutheria No 1 1
Pab-Mir-154-P6a-v2 None MIR-154 CACAUUA None None CM054694.2 105456721 105456776 + Eutheria Eutheria No 1 1
Pab-Mir-154-P6b None MIR-154 CCAAUAC None None CM054694.2 105488232 105488288 + Eutheria Eutheria No 1 1
Pab-Mir-154-P7 None MIR-154 UUGUGAC None None CM054694.2 105457010 105457067 + Eutheria Eutheria No 1
Pab-Mir-154-P8a None MIR-154 ACACACC None None CM054694.2 105457771 105457830 + Eutheria Eutheria No 1
Pab-Mir-154-P8b None MIR-154 ACACACC None None CM054694.2 105458088 105458147 + Eutheria Eutheria No 1
Pab-Mir-154-P9 None MIR-154 GAAACAU None None CM054694.2 105460648 105460703 + Eutheria Eutheria No 1
Pab-Mir-154-P10 None MIR-154 AGGUCAC None None CM054694.2 105461069 105461125 + Eutheria Eutheria No
Pab-Mir-154-P11 None MIR-154 AACAUUC None None CM054694.2 105463007 105463064 + Eutheria Eutheria No 1
Pab-Mir-154-P12 None MIR-154 AACAAAC None None CM054694.2 105464778 105464835 + Eutheria Eutheria No 1
Pab-Mir-154-P14 None MIR-154 AUGUCUG None None CM054694.2 105472227 105472282 + Eutheria Eutheria No
Pab-Mir-154-P16a None MIR-154 GAGGAUA None None CM054694.2 105474982 105475041 + Simiiformes Eutheria No
Pab-Mir-154-P16b None MIR-154 GAGGAUA None None CM054694.2 105476203 105476262 + Simiiformes Eutheria No
Pab-Mir-154-P17 None MIR-154 AUACAAG None None CM054694.2 105477924 105477986 + Eutheria Eutheria No 1
Pab-Mir-154-P18 None MIR-154 AUCGUAC None None CM054694.2 105478464 105478521 + Eutheria Eutheria No
Pab-Mir-154-P19 None MIR-154 UCAUACA None None CM054694.2 105479320 105479383 + Eutheria Eutheria No 1 1
Pab-Mir-154-P20 None MIR-154 UAAUAUC None None CM054694.2 105479902 105479960 + Eutheria Eutheria No 1
Pab-Mir-154-P21 None MIR-154 UAAUACA None None CM054694.2 105481573 105481632 + Eutheria Eutheria No 1
Pab-Mir-154-P23 None MIR-154 AUCAUAC None None CM054694.2 105484476 105484533 + Eutheria Eutheria No 1
Pab-Mir-154-P24 None MIR-154 AAGUUGU None None CM054694.2 105486315 105486372 + Eutheria Eutheria No 1
Pab-Mir-154-P25 None MIR-154 GAGGCUG None None CM054694.2 105487426 105487484 + Eutheria Eutheria No 1 1
Pab-Mir-154-P26 None MIR-154 AGGUUAU None None CM054694.2 105491784 105491841 + Eutheria Eutheria No 1
Pab-Mir-154-P28 None MIR-154 GAGUAUU None None CM054694.2 105492622 105492675 + Eutheria Eutheria No 1
Pab-Mir-154-P29 None MIR-154 UCACACA None None CM054694.2 105494088 105494147 + Eutheria Eutheria No
Pab-Mir-154-P30 None MIR-154 AAUGUUG None None CM054694.2 105497334 105497387 + Eutheria Eutheria No 1 1
Pab-Mir-154-P31 None MIR-154 GGUCGAC None None CM054694.2 105497485 105497539 + Eutheria Eutheria Unknown 1 1
Pab-Mir-154-P32 None MIR-154 GAUCGAC None None CM054694.2 105497626 105497681 + Eutheria Eutheria No 1 1
Pab-Mir-154-P33 None MIR-154 AUAUAAC None None CM054694.2 105497945 105498001 + Eutheria Eutheria No 1
Pab-Mir-154-P34 None MIR-154 AUAUUAU None None CM054694.2 105498741 105498796 + Eutheria Eutheria No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix