MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-154-P14

Family name MIR-154 (all species)
Seed AUGUCUG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-154-P1  Pab-Mir-154-P2-v1  Pab-Mir-154-P2-v2  Pab-Mir-154-P3-v1  Pab-Mir-154-P3-v2  Pab-Mir-154-P4  Pab-Mir-154-P5  Pab-Mir-154-P6a-v1  Pab-Mir-154-P6a-v2  Pab-Mir-154-P6b  Pab-Mir-154-P7  Pab-Mir-154-P8a  Pab-Mir-154-P8b  Pab-Mir-154-P9  Pab-Mir-154-P10  Pab-Mir-154-P11  Pab-Mir-154-P12  Pab-Mir-154-P16a  Pab-Mir-154-P16b  Pab-Mir-154-P17  Pab-Mir-154-P18  Pab-Mir-154-P19  Pab-Mir-154-P20  Pab-Mir-154-P21  Pab-Mir-154-P23  Pab-Mir-154-P24  Pab-Mir-154-P25  Pab-Mir-154-P26  Pab-Mir-154-P28  Pab-Mir-154-P29  Pab-Mir-154-P30  Pab-Mir-154-P31  Pab-Mir-154-P32  Pab-Mir-154-P33  Pab-Mir-154-P34 
Orthologues Bta-Mir-154-P14  Cfa-Mir-154-P14  Cja-Mir-154-P14  Cpo-Mir-154-P14  Dno-Mir-154-P14  Hsa-Mir-154-P14  Mml-Mir-154-P14  Mmr-Mir-154-P14  Ocu-Mir-154-P14 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105472227-105472282 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUGAGCCCUCCAGGGUAAGUGGAAAGAUGGUGGGCCGCAGAACAUGUGCUGAGUUCGUGCCAUAUGUCUGCUGACCAUCACCUUUAGAAGCCCCCUUUCGCUGAGGAGCCAGC
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Structure
        10        20           30        40        50       
GGGCUGAGCCCUCCAGGGUAA-  GG--|   A      GCC     A      CUGAG 
                      GU    AAAG UGGUGG   GCAGA CAUGUG     U
                      CG    UUUC ACUACC   CGUCU GUAUAC     U
CGACCGAGGAGUCGCUUUCCCC  AAGA^   C      AGU     -      CGUGC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-154-P14_5p*
mirBase accessionNone
Sequence 
0- UGGUGGGCCGCAGAACAUGUGC -22
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Mature sequence

Pab-Mir-154-P14_3p
mirBase accessionNone
Sequence 
35- UAUGUCUGCUGACCAUCACCU -56
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