MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-154-P34

Family name MIR-154 (all species)
Seed AUAUUAU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-154-P1  Pab-Mir-154-P2-v1  Pab-Mir-154-P2-v2  Pab-Mir-154-P3-v1  Pab-Mir-154-P3-v2  Pab-Mir-154-P4  Pab-Mir-154-P5  Pab-Mir-154-P6a-v1  Pab-Mir-154-P6a-v2  Pab-Mir-154-P6b  Pab-Mir-154-P7  Pab-Mir-154-P8a  Pab-Mir-154-P8b  Pab-Mir-154-P9  Pab-Mir-154-P10  Pab-Mir-154-P11  Pab-Mir-154-P12  Pab-Mir-154-P14  Pab-Mir-154-P16a  Pab-Mir-154-P16b  Pab-Mir-154-P17  Pab-Mir-154-P18  Pab-Mir-154-P19  Pab-Mir-154-P20  Pab-Mir-154-P21  Pab-Mir-154-P23  Pab-Mir-154-P24  Pab-Mir-154-P25  Pab-Mir-154-P26  Pab-Mir-154-P28  Pab-Mir-154-P29  Pab-Mir-154-P30  Pab-Mir-154-P31  Pab-Mir-154-P32  Pab-Mir-154-P33 
Orthologues Bta-Mir-154-P34  Cfa-Mir-154-P34  Cja-Mir-154-P34  Cpo-Mir-154-P34  Dno-Mir-154-P34  Eca-Mir-154-P34  Ete-Mir-154-P34  Hsa-Mir-154-P34  Laf-Mir-154-P34  Mml-Mir-154-P34  Mmr-Mir-154-P34  Ocu-Mir-154-P34 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105498741-105498796 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUCAGCGCUGCUCAGUGGUACCUGAAAUAGGUUGCCUGUGAGGUGUUCACUUUCUAUAUGAUGAAUAUUAUACAGUCAACCUCUUUCCGAUAUCGAAUCCCUUCCUCUUUGCUG
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Structure
        10          20        30        40        50       
GAGUCAGCGCUGCUCAG--|    CCU    U      C     AG       CUUUC 
                   UGGUA   GAAA AGGUUG CUGUG  GUGUUCA     U
                   GCUAU   CUUU UCCAAC GACAU  UAUAAGU     A
GUCGUUUCUCCUUCCCUAA^    AGC    C      U     AU       AGUAU 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-154-P34_5p*
mirBase accessionNone
Sequence 
0- AGGUUGCCUGUGAGGUGUUCA -21
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Mature sequence

Pab-Mir-154-P34_3p
mirBase accessionNone
Sequence 
35- AAUAUUAUACAGUCAACCUCU -56
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