MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-154-P14

Family name MIR-154 (all species)
Seed AUGUCUG
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Mir-154-P1  Cfa-Mir-154-P2-v1  Cfa-Mir-154-P2-v2  Cfa-Mir-154-P3-v1  Cfa-Mir-154-P3-v2  Cfa-Mir-154-P4  Cfa-Mir-154-P5  Cfa-Mir-154-P6a-v1  Cfa-Mir-154-P6a-v2  Cfa-Mir-154-P6b  Cfa-Mir-154-P6c  Cfa-Mir-154-P7  Cfa-Mir-154-P8a  Cfa-Mir-154-P8b  Cfa-Mir-154-P9  Cfa-Mir-154-P10  Cfa-Mir-154-P11  Cfa-Mir-154-P12  Cfa-Mir-154-P13  Cfa-Mir-154-P15  Cfa-Mir-154-P16  Cfa-Mir-154-P17  Cfa-Mir-154-P18  Cfa-Mir-154-P19  Cfa-Mir-154-P20  Cfa-Mir-154-P21  Cfa-Mir-154-P22  Cfa-Mir-154-P23  Cfa-Mir-154-P24  Cfa-Mir-154-P25  Cfa-Mir-154-P28  Cfa-Mir-154-P29  Cfa-Mir-154-P30  Cfa-Mir-154-P31  Cfa-Mir-154-P32  Cfa-Mir-154-P33  Cfa-Mir-154-P34  Cfa-Mir-154-P35 
Orthologues Bta-Mir-154-P14  Cja-Mir-154-P14  Cpo-Mir-154-P14  Dno-Mir-154-P14  Hsa-Mir-154-P14  Mml-Mir-154-P14  Mmr-Mir-154-P14  Ocu-Mir-154-P14  Pab-Mir-154-P14 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr8: 69270653-69270709 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P14)		 Mir-154-P1 chr8: 69253808-69253866 [+] UCSC Ensembl
Mir-154-P2-v2 chr8: 69255094-69255151 [+] UCSC Ensembl
Mir-154-P2-v1 chr8: 69255095-69255150 [+] UCSC Ensembl
Mir-154-P3-v1 chr8: 69255553-69255607 [+] UCSC Ensembl
Mir-154-P3-v2 chr8: 69255554-69255606 [+] UCSC Ensembl
Mir-154-P4 chr8: 69256764-69256820 [+] UCSC Ensembl
Mir-154-P6a-v2 chr8: 69257494-69257549 [+] UCSC Ensembl
Mir-154-P6a-v1 chr8: 69257494-69257549 [+] UCSC Ensembl
Mir-154-P7 chr8: 69257795-69257852 [+] UCSC Ensembl
Mir-154-P8a chr8: 69258540-69258597 [+] UCSC Ensembl
Mir-154-P8b chr8: 69258856-69258913 [+] UCSC Ensembl
Mir-154-P9 chr8: 69261399-69261454 [+] UCSC Ensembl
Mir-154-P11 chr8: 69263406-69263463 [+] UCSC Ensembl
Mir-154-P12 chr8: 69265169-69265226 [+] UCSC Ensembl
Mir-154-P35 chr8: 69267179-69267234 [+] UCSC Ensembl
Mir-376-P1 chr8: 69269753-69269810 [+] UCSC Ensembl
Mir-376-P2 chr8: 69270115-69270172 [+] UCSC Ensembl
Mir-376-P3 chr8: 69270499-69270556 [+] UCSC Ensembl
Mir-376-P4 chr8: 69270881-69270938 [+] UCSC Ensembl
Mir-376-P5 chr8: 69271259-69271316 [+] UCSC Ensembl
Mir-154-P15 chr8: 69271824-69271885 [+] UCSC Ensembl
Mir-154-P16 chr8: 69273238-69273297 [+] UCSC Ensembl
Mir-154-P17 chr8: 69274990-69275052 [+] UCSC Ensembl
Mir-154-P18 chr8: 69275495-69275554 [+] UCSC Ensembl
Mir-154-P19 chr8: 69276318-69276381 [+] UCSC Ensembl
Mir-154-P20 chr8: 69276881-69276939 [+] UCSC Ensembl
Mir-544-P1 chr8: 69277674-69277730 [+] UCSC Ensembl
Mir-154-P23 chr8: 69281090-69281147 [+] UCSC Ensembl
Mir-154-P24 chr8: 69283122-69283179 [+] UCSC Ensembl
Mir-134 chr8: 69283503-69283563 [+] UCSC Ensembl
Mir-154-P25 chr8: 69284239-69284297 [+] UCSC Ensembl
Mir-154-P28 chr8: 69289429-69289482 [+] UCSC Ensembl
Mir-154-P29 chr8: 69290943-69291002 [+] UCSC Ensembl
Mir-154-P30 chr8: 69293782-69293835 [+] UCSC Ensembl
Mir-154-P32 chr8: 69294073-69294128 [+] UCSC Ensembl
Mir-154-P33 chr8: 69294377-69294432 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUGCGCCCCGCCAGGGUAAGUGAAAAGCUGGUGGACCGCGGAACAUGUGCUUCGUUCGUGCCAUAUGUCUGCCGACCAUCACCUUUAGAAGCCCCCGCUCGCGGAGGAGCCACC
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Structure
        10         20          30        40        50        
GGGCUGCGCCCCGCCAG-  UAA  GA--|   C      ACC     A      CUUCG 
                  GG   GU    AAAG UGGUGG   GCGGA CAUGUG     U
                  CC   CG    UUUC ACUACC   CGUCU GUAUAC     U
CCACCGAGGAGGCGCUCG  CC-  AAGA^   C      AGC     -      CGUGC 
     110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-154-P14_5p*
mirBase accessionNone
Sequence 
0- CUGGUGGACCGCGGAACAUGUG -22
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Mature sequence

Cfa-Mir-154-P14_3p
mirBase accessionNone
Sequence 
36- UAUGUCUGCCGACCAUCACCU -57
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