MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-154-P14

Family name MIR-154 (all species)
Seed GGUCGAC
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Mir-154-P2-v1  Cfa-Mir-154-P2-v2  Cfa-Mir-154-P3a-v1  Cfa-Mir-154-P3a-v2  Cfa-Mir-154-P3b  Cfa-Mir-154-P4a  Cfa-Mir-154-P4b  Cfa-Mir-154-P5  Cfa-Mir-154-P6  Cfa-Mir-154-P7  Cfa-Mir-154-P8  Cfa-Mir-154-P9  Cfa-Mir-154-P10  Cfa-Mir-154-P12  Cfa-Mir-154-P13  Cfa-Mir-154-P15  Cfa-Mir-154-P16  Cfa-Mir-154-P17  Cfa-Mir-154-P18  Cfa-Mir-154-P19  Cfa-Mir-154-P20  Cfa-Mir-154-P21  Cfa-Mir-154-P22  Cfa-Mir-154-P23  Cfa-Mir-154-P24  Cfa-Mir-154-P25  Cfa-Mir-154-P26  Cfa-Mir-154-P27  Cfa-Mir-154-P28  Cfa-Mir-154-P29  Cfa-Mir-154-P30  Cfa-Mir-154-P31  Cfa-Mir-154-P33  Cfa-Mir-154-P34  Cfa-Mir-154-P35  Cfa-Mir-154-P36 
Orthologues Bta-Mir-154-P14  Cpo-Mir-154-P14  Dno-Mir-154-P14  Ete-Mir-154-P14  Hsa-Mir-154-P14  Mml-Mir-154-P14  Mmu-Mir-154-P14  Rno-Mir-154-P14 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 WIGL01203464.1: 1357-1411 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGCAGCACCGCUCUGGGGUACAGGACGGAUGGUCGACCAGUUGGAAAGUAAUUGUUUCGAAUGUACUUCACCUGGUCCACUAGCCGUCCGUGUCCACUGCAGCCUGCGGGGCCC
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Structure
        10          20         30        40        50        
GAGCAGCACCGCUCUGG--| U   -      A    C      U   AA    AUUGUU 
                   GG ACA GGACGG UGGU GACCAG UGG  AGUA      \
                   CC UGU CCUGCC AUCA CUGGUC ACU  UCAU      U
CCCGGGGCGUCCGACGUCA^ -   G      G    C      C   --    GUAAGC 
   110       100         90        80        70          60
Deep sequencing
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CommentNot in assembly but in trace archives.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-154-P14_5p
mirBase accessionNone
Sequence 
0- UGGUCGACCAGUUGGAAAGUAAU -23
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Star sequence

Cfa-Mir-154-P14_3p*
mirBase accessionNone
Sequence 
34- UACUUCACCUGGUCCACUAGC -55
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