MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-154-P14

Family name MIR-154 (all species)
Seed AUGUCUG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-154-P1  Cja-Mir-154-P2  Cja-Mir-154-P3  Cja-Mir-154-P4  Cja-Mir-154-P5  Cja-Mir-154-P6a  Cja-Mir-154-P6b  Cja-Mir-154-P7  Cja-Mir-154-P8a  Cja-Mir-154-P9  Cja-Mir-154-P10  Cja-Mir-154-P11  Cja-Mir-154-P12  Cja-Mir-154-P16a  Cja-Mir-154-P16b  Cja-Mir-154-P17  Cja-Mir-154-P18  Cja-Mir-154-P19  Cja-Mir-154-P20  Cja-Mir-154-P21  Cja-Mir-154-P22  Cja-Mir-154-P23  Cja-Mir-154-P24  Cja-Mir-154-P25  Cja-Mir-154-P26  Cja-Mir-154-P28  Cja-Mir-154-P29  Cja-Mir-154-P30  Cja-Mir-154-P31  Cja-Mir-154-P32  Cja-Mir-154-P33  Cja-Mir-154-P34 
Orthologues Bta-Mir-154-P14  Cfa-Mir-154-P14  Cpo-Mir-154-P14  Dno-Mir-154-P14  Hsa-Mir-154-P14  Mml-Mir-154-P14  Mmr-Mir-154-P14  Ocu-Mir-154-P14  Pab-Mir-154-P14 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131854560-131854615 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUGAGCCCUCCUGGGUAAGUGGAAAGGUGGUGGACCGCAGAACAUGUGCUGAGUUCGUGCCAUAUGUCUGCUGACCAUCACCUUUAGAAGCCCCCUUUCGCUGAGGAGCCAGC
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Structure
        10        20           30        40        50       
GGGCUGAGCCCUCCUGGGUAA-  GG--|          ACC     A      CUGAG 
                      GU    AAAGGUGGUGG   GCAGA CAUGUG     U
                      CG    UUUCCACUACC   CGUCU GUAUAC     U
CGACCGAGGAGUCGCUUUCCCC  AAGA^          AGU     -      CGUGC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-154-P14_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGUGGACCGCAGAACAUGUGC -22
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Mature sequence

Cja-Mir-154-P14_3p
mirBase accessionNone
Sequence 
35- UAUGUCUGCUGACCAUCACCU -56
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