| MirGeneDB ID | Mmr-Mir-1842-v1 |
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| Family name |
MIR-1842 (all species) |
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| Seed |
UGGCUCU |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
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| Paralogues |
Mmr-Mir-1842-v2
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| Orthologues |
Bta-Mir-1842-v1
Cfa-Mir-1842-v1
Cpo-Mir-1842-v1
Dno-Mir-1842-v1
Eca-Mir-1842-v1
Ocu-Mir-1842
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007677.1: 2169459-2169519 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCUGCGCCUGUGAGGUUGGUGGUGCUGACGUUGGCUCUGCGAGGUCGGCUCAAGGUGGGUCUGGAUAUUGAGCAGGCCUGUCAGGGCGUUGUCACCCACACCAGGAGCACGUGGCAGGUGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCUGCGCCUGUGAGGUU--| GUGC UUG CG G AGGUGGG
GGUG UGACG GCUCUG AGGUC GCUCA U
CCAC ACUGU CGGGAC UCCGG CGAGU C
CGUGGACGGUGCACGAGGA^ ACCC UG- UG A UAUAGGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Mature sequence |
Mmr-Mir-1842-v1_5p |
| mirBase accession | None |
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| Sequence |
0- UUGGCUCUGCGAGGUCGGCUCA -22
Get sequence
|
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| Star sequence |
Mmr-Mir-1842-v1_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
40- AGCAGGCCUGUCAGGGCGUUG -61
Get sequence
|
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