| MirGeneDB ID | Mmr-Mir-1842-v2 |
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| Family name |
MIR-1842 (all species) |
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| Seed |
GGCUCUG |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
|
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| Paralogues |
Mmr-Mir-1842-v1
|
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| Orthologues |
Bta-Mir-1842-v2
Cfa-Mir-1842-v2
Cpo-Mir-1842-v2
Dno-Mir-1842-v2
Eca-Mir-1842-v2
Ocu-Mir-1842
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007677.1: 2169459-2169518 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CUGCGCCUGUGAGGUUGGUGGUGCUGACGUUGGCUCUGCGAGGUCGGCUCAAGGUGGGUCUGGAUAUUGAGCAGGCCUGUCAGGGCGUUGUCACCCACACCAGGAGCACGUGGCAGGUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGCGCCUGUGAGGUUGG C---| UUG CG G GGUGGG
UGGUG UGACG GCUCUG AGGUC GCUCAA U
ACCAC ACUGU CGGGAC UCCGG CGAGUU C
CGUGGACGGUGCACGAGG ACCC^ UG- UG A AUAGGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Mmr-Mir-1842-v2_5p |
| mirBase accession | None |
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| Sequence |
0- UGGCUCUGCGAGGUCGGCUCAA -22
Get sequence
|
|---|
| Star sequence |
Mmr-Mir-1842-v2_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- GAGCAGGCCUGUCAGGGCGUUG -60
Get sequence
|
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