MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-1842-v2

Family name MIR-1842 (all species)
Seed GGCUCUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-1842
Paralogues Dno-Mir-1842-v1 
Orthologues Bta-Mir-1842-v2  Cfa-Mir-1842-v2  Cpo-Mir-1842-v2  Eca-Mir-1842-v2  Mmr-Mir-1842-v2  Ocu-Mir-1842 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH582338: 68191-68249 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1842-v2)		 Mir-1842-v1 JH582338: 68190-68249 [+] UCSC Ensembl
Mir-1842-v2 JH582338: 68191-68249 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCGCCGGGAGGCUGGUGGGGUUGACCUUGGCUCUGCGAGGUCGGCUCAAGGUGGGUCUGACGUUGAGCAGGCCUGUCAGGGCAUCGUUACUCACAGCAGGAGCAUGCAGCAGGGCG
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Structure
        10             20        30        40        50         
CCUGCGCCGGGAGGCUG-----|    GU    CUUG      CG     G      GGUGGG 
                      GUGGG  UGAC    GCUCUG  AGGUC GCUCAA      \
                      CACUC  AUUG    CGGGAC  UCCGG CGAGUU      U
GCGGGACGACGUACGAGGACGA^    --    CUA-      UG     A      GCAGUC 
       110       100          90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Dno-Mir-1842-v2_5p (predicted)
mirBase accessionMIMAT0048051
Sequence 
0- UGGCUCUGCGAGGUCGGCUCAA -22
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Star sequence

Dno-Mir-1842-v2_3p* (predicted)
mirBase accessionMIMAT0048052
Sequence 
37- GAGCAGGCCUGUCAGGGCAUCG -59
Get sequence