MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-376-P5

Family name MIR-376 (all species)
Seed UAGAUUC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-376-P1  Mmr-Mir-376-P2  Mmr-Mir-376-P3  Mmr-Mir-376-P4 
Orthologues Bta-Mir-376-P5  Cfa-Mir-376-P5  Cja-Mir-376-P5  Cpo-Mir-376-P5  Dno-Mir-376-P5  Eca-Mir-376-P5  Ete-Mir-376-P5  Hsa-Mir-376-P5  Laf-Mir-376-P5  Mml-Mir-376-P5  Mmu-Mir-376-P5  Ocu-Mir-376-P5  Pab-Mir-376-P5  Rno-Mir-376-P5 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 12735323-12735380 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-376-P5)
Mir-154-P2-v2 CM007663.1: 12719569-12719626 [+] UCSC Ensembl
Mir-154-P2-v1 CM007663.1: 12719570-12719625 [+] UCSC Ensembl
Mir-154-P37 CM007663.1: 12721366-12721423 [+] UCSC Ensembl
Mir-154-P17 CM007663.1: 12739835-12739897 [+] UCSC Ensembl
Mir-154-P22 CM007663.1: 12745610-12745663 [+] UCSC Ensembl
Mir-154-P30 CM007663.1: 12759249-12759302 [+] UCSC Ensembl
Mir-154-P33 CM007663.1: 12759838-12759893 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGACGGAAUGCUUCUUUGGUAUUUAAAAGGUAGAUUCUCCUUCUAUGAGUACAUUAUUUACGAUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUGUGAGAACCU
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Structure
        10          20        30        40        50         
CGGACGGAAUGCUUCUU--|      U    G  A    C    U      GUACAUUAU 
                   UGGUAUU AAAA GU GAUU UCCU CUAUGA         \
                   ACUAUGA UUUU CA CUAA AGGA GAUACU         U
UCCAAGAGUGUCGUCGUAA^      C    G  C    A    -      AAUUAGCAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-376-P5_5p

mirBase accessionNone
Sequence
0- GUAGAUUCUCCUUCUAUGAGUA -22
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Co-mature sequence

Mmr-Mir-376-P5_3p

mirBase accessionNone
Sequence
37- AUCAUAGAGGAAAAUCCACGU -58
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