MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-154-P2-v1

Family name MIR-154 (all species)
Seed AGUAGAC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-411a
Paralogues Mmr-Mir-154-P1  Mmr-Mir-154-P2-v2  Mmr-Mir-154-P3-v1  Mmr-Mir-154-P3-v2  Mmr-Mir-154-P5  Mmr-Mir-154-P6a-v1  Mmr-Mir-154-P6a-v2  Mmr-Mir-154-P6b  Mmr-Mir-154-P6c  Mmr-Mir-154-P7  Mmr-Mir-154-P8a  Mmr-Mir-154-P8b  Mmr-Mir-154-P9  Mmr-Mir-154-P10  Mmr-Mir-154-P11  Mmr-Mir-154-P12  Mmr-Mir-154-P14  Mmr-Mir-154-P16  Mmr-Mir-154-P17  Mmr-Mir-154-P18  Mmr-Mir-154-P20  Mmr-Mir-154-P21  Mmr-Mir-154-P22  Mmr-Mir-154-P23  Mmr-Mir-154-P24  Mmr-Mir-154-P25  Mmr-Mir-154-P26  Mmr-Mir-154-P28  Mmr-Mir-154-P29  Mmr-Mir-154-P30  Mmr-Mir-154-P31  Mmr-Mir-154-P32  Mmr-Mir-154-P33  Mmr-Mir-154-P34  Mmr-Mir-154-P37 
Orthologues Bta-Mir-154-P2-v1  Bta-Mir-154-P2-v2  Cfa-Mir-154-P2-v1  Cfa-Mir-154-P2-v2  Cja-Mir-154-P2  Cpo-Mir-154-P2-v1  Cpo-Mir-154-P2-v2  Dno-Mir-154-P2-v1  Dno-Mir-154-P2-v2  Eca-Mir-154-P2-v1  Eca-Mir-154-P2-v2  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Hsa-Mir-154-P2-v1  Hsa-Mir-154-P2-v2  Laf-Mir-154-P2  Mml-Mir-154-P2-v1  Mml-Mir-154-P2-v2  Mmu-Mir-154-P2-v1  Mmu-Mir-154-P2-v2  Ocu-Mir-154-P2-v1  Ocu-Mir-154-P2-v2  Pab-Mir-154-P2-v1  Pab-Mir-154-P2-v2  Rno-Mir-154-P2-v1  Rno-Mir-154-P2-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007663.1: 12719570-12719625 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P2-v1)		 Mir-154-P2-v2 CM007663.1: 12719569-12719626 [+] UCSC Ensembl
Mir-154-P2-v1 CM007663.1: 12719570-12719625 [+] UCSC Ensembl
Mir-154-P37 CM007663.1: 12721366-12721423 [+] UCSC Ensembl
Mir-154-P17 CM007663.1: 12739835-12739897 [+] UCSC Ensembl
Mir-154-P22 CM007663.1: 12745610-12745663 [+] UCSC Ensembl
Mir-154-P30 CM007663.1: 12759249-12759302 [+] UCSC Ensembl
Mir-154-P33 CM007663.1: 12759838-12759893 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGGCGUCUCUGUGUGGUACUUGGAGAGAUAGUAGACCGUAUAGCGUACGCUUUAUCUGUGACGUAUGUAACACGGUCCACUAACCCUCAGUAUCAAAUCCAUCCCCGAGGCUCC
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Structure
        10            20        30        40        50       
CUCGGCGUCUCUGUGUG----|    UG   AGA    A      AUA       CUUUA 
                     GUACU  GAG   UAGU GACCGU   GCGUACG     U
                     UAUGA  CUC   AUCA CUGGCA   UGUAUGC     C
CCUCGGAGCCCCUACCUAAAC^    --   CCA    C      CAA       AGUGU 
    110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-154-P2-v1_5p
mirBase accessionMIMAT0049194
Sequence 
0- UAGUAGACCGUAUAGCGUACG -21
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Star sequence

Mmr-Mir-154-P2-v1_3p*
mirBase accessionNone
Sequence 
35- UAUGUAACACGGUCCACUAAC -56
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