| MirGeneDB ID | Cja-Mir-376-P5 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | UCAUAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-376-P1 Cja-Mir-376-P2 Cja-Mir-376-P3 Cja-Mir-376-P4 |
| Orthologues | Bta-Mir-376-P5 Cfa-Mir-376-P5 Cpo-Mir-376-P5 Dno-Mir-376-P5 Eca-Mir-376-P5 Ete-Mir-376-P5 Hsa-Mir-376-P5 Laf-Mir-376-P5 Mml-Mir-376-P5 Mmr-Mir-376-P5 Mmu-Mir-376-P5 Ocu-Mir-376-P5 Pab-Mir-376-P5 Rno-Mir-376-P5 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131855098-131855155 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGAUGGAAGCCUUCUUUGGUAUUUAAAAGGUAGAUUCUCCUUCUAUGAGUACAUUAUUUAUGAUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUUUGAAAACCUGet precursor sequence |
| Structure | 10 20 30 40 50 UGGAUGGAAGCCUUCUU--| U G A C U GUACAUUAU UGGUAUU AAAA GU GAUU UCCU CUAUGA \ ACUAUGA UUUU CA CUAA AGGA GAUACU U UCCAAAAGUUUCGUCGUAA^ C G C A - AAUUAGUAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-376-P5_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUAGAUUCUCCUUCUAUGAGUA -22
Get sequence
|
| Mature sequence | Cja-Mir-376-P5_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUCAUAGAGGAAAAUCCACGU -58
Get sequence
|
