| MirGeneDB ID | Cja-Mir-376-P3 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | UCAUAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-376-P1 Cja-Mir-376-P2 Cja-Mir-376-P4 Cja-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P3 Cfa-Mir-376-P3 Cpo-Mir-376-P3 Dno-Mir-376-P3 Eca-Mir-376-P3 Ete-Mir-376-P3 Hsa-Mir-376-P3 Laf-Mir-376-P3 Mml-Mir-376-P3 Mmr-Mir-376-P3 Ocu-Mir-376-P3 Pab-Mir-376-P3 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131854407-131854464 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGGAUGAGAACUUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUCUAUGGUUACGUGUUUGGUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCCUUGGGAACAUGet precursor sequence |
| Structure | 10 20 30 40 50 UGGGAUGAGAACUUCUU--| U G A U CGUGUU UGGUAUU AAAA GU GAUUUUCCU CUAUGGUUA \ ACUAUGA UUUU CA CUAAAAGGA GAUACUAAU U UACAAGGGUUCCGUCGUAA^ C G C - UGGUGG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-376-P3_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUAGAUUUUCCUUCUAUGGUUA -22
Get sequence
|
| Mature sequence | Cja-Mir-376-P3_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUCAUAGAGGAAAAUCCACGU -58
Get sequence
|
