MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-376-P3

Family name MIR-376 (all species)
Seed UCAUAGA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-376-P1  Cja-Mir-376-P2  Cja-Mir-376-P4  Cja-Mir-376-P5 
Orthologues Bta-Mir-376-P3  Cfa-Mir-376-P3  Cpo-Mir-376-P3  Dno-Mir-376-P3  Eca-Mir-376-P3  Ete-Mir-376-P3  Hsa-Mir-376-P3  Laf-Mir-376-P3  Mml-Mir-376-P3  Mmr-Mir-376-P3  Ocu-Mir-376-P3  Pab-Mir-376-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131854407-131854464 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGAUGAGAACUUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUCUAUGGUUACGUGUUUGGUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCCUUGGGAACAU
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Structure
        10          20        30        40        50         
UGGGAUGAGAACUUCUU--|      U    G  A         U         CGUGUU 
                   UGGUAUU AAAA GU GAUUUUCCU CUAUGGUUA      \
                   ACUAUGA UUUU CA CUAAAAGGA GAUACUAAU      U
UACAAGGGUUCCGUCGUAA^      C    G  C         -         UGGUGG 
      110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-376-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUAGAUUUUCCUUCUAUGGUUA -22
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Mature sequence

Cja-Mir-376-P3_3p (predicted)
mirBase accessionNone
Sequence 
37- AUCAUAGAGGAAAAUCCACGU -58
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