| MirGeneDB ID | Pab-Mir-376-P3 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | UCAUAGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-376-P1 Pab-Mir-376-P2 Pab-Mir-376-P4 Pab-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P3 Cfa-Mir-376-P3 Cja-Mir-376-P3 Cpo-Mir-376-P3 Dno-Mir-376-P3 Eca-Mir-376-P3 Ete-Mir-376-P3 Hsa-Mir-376-P3 Laf-Mir-376-P3 Mml-Mir-376-P3 Mmr-Mir-376-P3 Ocu-Mir-376-P3 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105472074-105472131 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGGGAUGAAACCUUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUCUAUGGUUACGUGUUUGAUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCCUUGGGAUCAUGet precursor sequence |
| Structure | 10 20 30 40 50 CGGGAUGAAACCUUCUU--| U G A U CGUGUU UGGUAUU AAAA GU GAUUUUCCU CUAUGGUUA \ ACUAUGA UUUU CA CUAAAAGGA GAUACUAAU U UACUAGGGUUCCGUCGUAA^ C G C - UGGUAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-376-P3_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUAGAUUUUCCUUCUAUGGUUA -22
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|
| Mature sequence | Pab-Mir-376-P3_3p |
| mirBase accession | None |
| Sequence |
37- AUCAUAGAGGAAAAUCCACGU -58
Get sequence
|
