| MirGeneDB ID | Pab-Mir-376-P2 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | ACAUAGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-376-P1 Pab-Mir-376-P3 Pab-Mir-376-P4 Pab-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P2 Cfa-Mir-376-P2 Cja-Mir-376-P2 Cpo-Mir-376-P2 Dno-Mir-376-P2 Eca-Mir-376-P2 Ete-Mir-376-P2 Hsa-Mir-376-P2 Laf-Mir-376-P2 Mml-Mir-376-P2 Mmr-Mir-376-P2 Mmu-Mir-376-P2 Ocu-Mir-376-P2 Rno-Mir-376-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105471685-105471742 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGGACUCAAUCCUUCUUUGGUAUUUAAAAGGUGGAUAUUCCUUCUAUGUUUAUGUUAUUUAUGGUUAAACAUAGAGGAAAUUCCACGUUUUCAGUAUCAAAUGCUGCUUGGAAACAUUGet precursor sequence |
| Structure | 10 20 30 40 50 AGGACUCAAUCCUUCUU--| U G UA U UGUUAU UGGUAUU AAAA GUGGA UUCCU CUAUGUUUA \ ACUAUGA UUUU CACCU AAGGA GAUACAAAU U UUACAAAGGUUCGUCGUAA^ C G UA - UGGUAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Pab-Mir-376-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAUAUUCCUUCUAUGUUUA -22
Get sequence
|
| Mature sequence | Pab-Mir-376-P2_3p |
| mirBase accession | None |
| Sequence |
37- AACAUAGAGGAAAUUCCACGU -58
Get sequence
|
