MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-376-P2

Family name MIR-376 (all species)
Seed ACAUAGA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-376-P1  Cja-Mir-376-P3  Cja-Mir-376-P4  Cja-Mir-376-P5 
Orthologues Bta-Mir-376-P2  Cfa-Mir-376-P2  Cpo-Mir-376-P2  Dno-Mir-376-P2  Eca-Mir-376-P2  Ete-Mir-376-P2  Hsa-Mir-376-P2  Laf-Mir-376-P2  Mml-Mir-376-P2  Mmr-Mir-376-P2  Mmu-Mir-376-P2  Ocu-Mir-376-P2  Pab-Mir-376-P2  Rno-Mir-376-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131853973-131854030 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGACUCAAUCCUUCUUUGGUAUUUAAAAGGUGGAUAUUCCUUCUAUGUUUAUGUUGUUUGUGGUUAAACAUAGAGGAAAUUCCACGUUUUCAGUAUCAAAUGCUGCUUGGAAACAUU
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Structure
        10          20        30        40        50         
AGGACUCAAUCCUUCUU--|      U    G     UA     U         UGUUGU 
                   UGGUAUU AAAA GUGGA  UUCCU CUAUGUUUA      \
                   ACUAUGA UUUU CACCU  AAGGA GAUACAAAU      U
UUACAAAGGUUCGUCGUAA^      C    G     UA     -         UGGUGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Cja-Mir-376-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGGAUAUUCCUUCUAUGUUUA -22
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Mature sequence

Cja-Mir-376-P2_3p (predicted)
mirBase accessionNone
Sequence 
37- AACAUAGAGGAAAUUCCACGU -58
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