| MirGeneDB ID | Cja-Mir-376-P2 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | ACAUAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-376-P1 Cja-Mir-376-P3 Cja-Mir-376-P4 Cja-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P2 Cfa-Mir-376-P2 Cpo-Mir-376-P2 Dno-Mir-376-P2 Eca-Mir-376-P2 Ete-Mir-376-P2 Hsa-Mir-376-P2 Laf-Mir-376-P2 Mml-Mir-376-P2 Mmr-Mir-376-P2 Mmu-Mir-376-P2 Ocu-Mir-376-P2 Pab-Mir-376-P2 Rno-Mir-376-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131853973-131854030 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGGACUCAAUCCUUCUUUGGUAUUUAAAAGGUGGAUAUUCCUUCUAUGUUUAUGUUGUUUGUGGUUAAACAUAGAGGAAAUUCCACGUUUUCAGUAUCAAAUGCUGCUUGGAAACAUUGet precursor sequence |
| Structure | 10 20 30 40 50 AGGACUCAAUCCUUCUU--| U G UA U UGUUGU UGGUAUU AAAA GUGGA UUCCU CUAUGUUUA \ ACUAUGA UUUU CACCU AAGGA GAUACAAAU U UUACAAAGGUUCGUCGUAA^ C G UA - UGGUGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Cja-Mir-376-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAUAUUCCUUCUAUGUUUA -22
Get sequence
|
| Mature sequence | Cja-Mir-376-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AACAUAGAGGAAAUUCCACGU -58
Get sequence
|
