| MirGeneDB ID | Cja-Mir-376-P4 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | UCAUAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-376-P1 Cja-Mir-376-P2 Cja-Mir-376-P3 Cja-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P4 Cfa-Mir-376-P4 Cpo-Mir-376-P4 Dno-Mir-376-P4 Eca-Mir-376-P4 Hsa-Mir-376-P4 Laf-Mir-376-P4 Mml-Mir-376-P4 Mmr-Mir-376-P4 Mmu-Mir-376-P4 Ocu-Mir-376-P4 Pab-Mir-376-P4 Rno-Mir-376-P4 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131854787-131854844 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAGCCCAGUCCUUCUUUGGUAUUUAAAACGUGGAUAUUCCUUCUAUGUUUACGUGAUUCUUGGUUAAUCAUAGAGGAAAAUCCAUGUUUUCAGUAUCAAAUGCUGCUUUGGAAGUGUGet precursor sequence |
| Structure | 10 20 30 40 50 AGAGCCCAGUCCUUCUU--| U A U U CGUGAU UGGUAUU AAAACGUGGAU UUCCU CUAUG UUA \ ACUAUGA UUUUGUACCUA AAGGA GAUAC AAU U UGUGAAGGUUUCGUCGUAA^ C A - U UGGUUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-376-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAUAUUCCUUCUAUGUUUA -22
Get sequence
|
| Mature sequence | Cja-Mir-376-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUCAUAGAGGAAAAUCCAUGU -58
Get sequence
|
