MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-376-P4

Family name MIR-376 (all species)
Seed ACAUAGA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues Dno-Mir-376-P1  Dno-Mir-376-P2  Dno-Mir-376-P3 
Orthologues Bta-Mir-376-P4  Cfa-Mir-376-P4  Cpo-Mir-376-P4  Ete-Mir-376-P4  Hsa-Mir-376-P4  Mml-Mir-376-P4  Mmu-Mir-376-P4  Ocu-Mir-376-P4  Rno-Mir-376-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
554781830_name_G734P6275FE9_T0_mate_554785391: 45-102 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGACUAAAUCCUUCUUUGGUAUUUAAAAUGUGGAUAUUCCUUCUAUGUUUAUGUUAUUGAUGGUUAAACAUAGAGGAAAUUCCACGUUUUCAGUAUCAAAUGCUGCUGAAUCCACCA
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Structure
        10          20        30        40        50         
AGGACUAAAUCCUUCUU--|      U          UA     U         UGUUAU 
                   UGGUAUU AAAAUGUGGA  UUCCU CUAUGUUUA      \
                   ACUAUGA UUUUGCACCU  AAGGA GAUACAAAU      U
ACCACCUAAGUCGUCGUAA^      C          UA     -         UGGUAG 
      110       100        90        80         70        60
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Star sequence

Dno-Mir-376-P4_5p*

mirBase accessionNone
Sequence
0- GUGGAUAUUCCUUCUAUGUUUA -22
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Mature sequence

Dno-Mir-376-P4_3p

mirBase accessionNone
Sequence
37- AACAUAGAGGAAAUUCCACGU -58
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