MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-154-P8a

Family name MIR-154 (all species)
Seed ACACACC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-329
Paralogues Dno-Mir-154-P1  Dno-Mir-154-P2-v1  Dno-Mir-154-P2-v2  Dno-Mir-154-P3-v1  Dno-Mir-154-P3-v2  Dno-Mir-154-P4  Dno-Mir-154-P5  Dno-Mir-154-P6a-v1  Dno-Mir-154-P6a-v2  Dno-Mir-154-P6b  Dno-Mir-154-P7  Dno-Mir-154-P8b  Dno-Mir-154-P9  Dno-Mir-154-P10  Dno-Mir-154-P11  Dno-Mir-154-P12  Dno-Mir-154-P13  Dno-Mir-154-P14  Dno-Mir-154-P16c  Dno-Mir-154-P16d  Dno-Mir-154-P17  Dno-Mir-154-P18  Dno-Mir-154-P19  Dno-Mir-154-P20  Dno-Mir-154-P22  Dno-Mir-154-P23  Dno-Mir-154-P24  Dno-Mir-154-P25  Dno-Mir-154-P26  Dno-Mir-154-P27  Dno-Mir-154-P28-v1  Dno-Mir-154-P28-v2  Dno-Mir-154-P29  Dno-Mir-154-P30  Dno-Mir-154-P31  Dno-Mir-154-P32  Dno-Mir-154-P33  Dno-Mir-154-P34 
Orthologues Bta-Mir-154-P8a  Cfa-Mir-154-P8a  Cja-Mir-154-P8a  Cpo-Mir-154-P8-o1  Eca-Mir-154-P8a  Ete-Mir-154-P8a  Hsa-Mir-154-P8a  Laf-Mir-154-P8  Mml-Mir-154-P8a  Mmr-Mir-154-P8a  Mmu-Mir-154-P8-o1  Ocu-Mir-154-P8-o1  Pab-Mir-154-P8a  Rno-Mir-154-P8-o1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH578221: 129500-129559 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P8a)		 Mir-154-P1 JH578221: 124581-124639 [+] UCSC Ensembl
Mir-154-P2-v2 JH578221: 125808-125865 [+] UCSC Ensembl
Mir-154-P2-v1 JH578221: 125809-125864 [+] UCSC Ensembl
Mir-154-P3-v1 JH578221: 126266-126320 [+] UCSC Ensembl
Mir-154-P3-v2 JH578221: 126267-126319 [+] UCSC Ensembl
Mir-154-P4 JH578221: 127474-127530 [+] UCSC Ensembl
Mir-154-P5 JH578221: 128018-128073 [+] UCSC Ensembl
Mir-154-P6a-v1 JH578221: 128180-128235 [+] UCSC Ensembl
Mir-154-P6a-v2 JH578221: 128180-128235 [+] UCSC Ensembl
Mir-154-P7 JH578221: 128465-128522 [+] UCSC Ensembl
Mir-154-P8b JH578221: 129181-129240 [+] UCSC Ensembl
Mir-154-P8a JH578221: 129500-129559 [+] UCSC Ensembl
Mir-154-P9 JH578221: 131208-131263 [+] UCSC Ensembl
Mir-154-P10 JH578221: 131614-131668 [+] UCSC Ensembl
Mir-154-P11 JH578221: 133458-133515 [+] UCSC Ensembl
Mir-154-P12 JH578221: 135322-135379 [+] UCSC Ensembl
Mir-154-P14 JH578221: 141458-141514 [+] UCSC Ensembl
Mir-376-P4 JH578221: 141684-141741 [+] UCSC Ensembl
Mir-376-P5 JH578221: 142061-142118 [+] UCSC Ensembl
Mir-154-P17 JH578221: 146722-146784 [+] UCSC Ensembl
Mir-154-P18 JH578221: 147235-147292 [+] UCSC Ensembl
Mir-154-P19 JH578221: 147994-148057 [+] UCSC Ensembl
Mir-154-P20 JH578221: 148479-148537 [+] UCSC Ensembl
Mir-154-P22 JH578221: 152174-152227 [+] UCSC Ensembl
Mir-154-P23 JH578221: 152628-152685 [+] UCSC Ensembl
Mir-154-P24 JH578221: 155333-155390 [+] UCSC Ensembl
Mir-134 JH578221: 155647-155706 [+] UCSC Ensembl
Mir-154-P25 JH578221: 156384-156442 [+] UCSC Ensembl
Mir-154-P6b JH578221: 157215-157271 [+] UCSC Ensembl
Mir-154-P26 JH578221: 160400-160457 [+] UCSC Ensembl
Mir-154-P27 JH578221: 160728-160788 [+] UCSC Ensembl
Mir-154-P28-v2 JH578221: 161286-161341 [+] UCSC Ensembl
Mir-154-P28-v1 JH578221: 161287-161340 [+] UCSC Ensembl
Mir-154-P29 JH578221: 162674-162733 [+] UCSC Ensembl
Mir-541 JH578221: 164635-164700 [+] UCSC Ensembl
Mir-154-P31 JH578221: 165559-165614 [+] UCSC Ensembl
Mir-154-P32 JH578221: 165682-165737 [+] UCSC Ensembl
Mir-154-P33 JH578221: 165975-166030 [+] UCSC Ensembl
Mir-154-P34 JH578221: 166555-166610 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGUCAGUCUCACGCUGUGGUACCUGAAGAGAGGUUUUCUGGGUUUCUGUUUCUUUAUUGAUGAUGAAACACACCUGGUUAACCUCUUUUCCGGUAUCAAAUCCCACCUUCUGGUCCAG
Get precursor sequence
Structure
        10          20        30        40        50        60
CUUGUCAGUCUCACGCUG--|      U           UU UG   UUC      UUUAU 
                    UGGUACC GAAGAGAGGUU  C  GGU   UGUUUC     U
                    ACUAUGG CUUUUCUCCAA  G  CCA   ACAAAG     G
GACCUGGUCUUCCACCCUAA^      C           UU GU   C--      UAGUA 
.       110       100        90        80          70
Deep sequencing
CommentThe highest set of reads is 1 nt shorter than human and the other mammals at both ends. It is possible that one paralogue has this set of reads and the other the standard set of reads.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Star sequence

Dno-Mir-154-P8a_5p*
mirBase accessionMIMAT0047809
Sequence 
0- AGAGGUUUUCUGGGUUUCUGUUUC -24
Get sequence
Mature sequence

Dno-Mir-154-P8a_3p
mirBase accessionMIMAT0047810
Sequence 
38- AACACACCUGGUUAACCUCUUU -60
Get sequence