| MirGeneDB ID | Pab-Mir-376-P1 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | UCAUAGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-376-P2 Pab-Mir-376-P3 Pab-Mir-376-P4 Pab-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P1 Cfa-Mir-376-P1 Cja-Mir-376-P1 Eca-Mir-376-P1 Hsa-Mir-376-P1 Laf-Mir-376-P1 Mml-Mir-376-P1 Mmr-Mir-376-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105471348-105471405 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGGGCUGUUCCCACUUUUCCCAUCUAAAAGGUGGAUGUUCCUUCUGUGCUUACAGGAUUUAUGGUUAAUCAUAGAGGAAAAUCCACAUUUUCAGUAUCUAAGGCUGCUUUUGAAACAUGet precursor sequence |
| Structure | 10 20 30 40 50 AGGGCUGUUCCCACUUUUCCCAU- -| G G U C CAGGAU CU AAAA GUGGAU UUCCU CUGUG UUA \ GA UUUU CACCUA AAGGA GAUAC AAU U UACAAAGUUUUCGUCGGAAUCUAU C^ A A - U UGGUAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-376-P1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAUGUUCCUUCUGUGCUUA -22
Get sequence
|
| Mature sequence | Pab-Mir-376-P1_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUCAUAGAGGAAAAUCCACAU -58
Get sequence
|
