MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-376-P1

Family name MIR-376 (all species)
Seed CCGUAGG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-376-P2  Laf-Mir-376-P3  Laf-Mir-376-P4  Laf-Mir-376-P5 
Orthologues Bta-Mir-376-P1  Cfa-Mir-376-P1  Cja-Mir-376-P1  Eca-Mir-376-P1  Hsa-Mir-376-P1  Mml-Mir-376-P1  Mmr-Mir-376-P1  Pab-Mir-376-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75544697-75544754 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGGCUAUUCAAUUUUGGGUGUUCAAAAGGUGGAUAUUCCUUCUAUGUUUAUGUGAUUUAUGGUUAGCCGUAGGGGAAAAUCCACAUUUUUAGUAUCUGAAGUUGCUUUUAAAACAU
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Structure
        10          20        30        40        50         
CAAGGCUAUUCAAUUUU--|      C    G      A     U     U   UGUGAU 
                   GGGUGUU AAAA GUGGAU UUCCU CUAUG UUA      \
                   UCUAUGA UUUU CACCUA AAGGG GAUGC GAU      U
UACAAAAUUUUCGUUGAAG^      U    A      A     -     C   UGGUAU 
      110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-376-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGGAUAUUCCUUCUAUGUUUA -22
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Mature sequence

Laf-Mir-376-P1_3p (predicted)
mirBase accessionNone
Sequence 
37- GCCGUAGGGGAAAAUCCACAU -58
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