| MirGeneDB ID | Laf-Mir-376-P1 |
|---|---|
| Family name | MIR-376 (all species) |
| Seed | CCGUAGG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-376-P2 Laf-Mir-376-P3 Laf-Mir-376-P4 Laf-Mir-376-P5 |
| Orthologues | Bta-Mir-376-P1 Cfa-Mir-376-P1 Cja-Mir-376-P1 Eca-Mir-376-P1 Hsa-Mir-376-P1 Mml-Mir-376-P1 Mmr-Mir-376-P1 Pab-Mir-376-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010036.1: 75544697-75544754 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAAGGCUAUUCAAUUUUGGGUGUUCAAAAGGUGGAUAUUCCUUCUAUGUUUAUGUGAUUUAUGGUUAGCCGUAGGGGAAAAUCCACAUUUUUAGUAUCUGAAGUUGCUUUUAAAACAUGet precursor sequence |
| Structure | 10 20 30 40 50 CAAGGCUAUUCAAUUUU--| C G A U U UGUGAU GGGUGUU AAAA GUGGAU UUCCU CUAUG UUA \ UCUAUGA UUUU CACCUA AAGGG GAUGC GAU U UACAAAAUUUUCGUUGAAG^ U A A - C UGGUAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), UGUG in loop |
| Star sequence | Laf-Mir-376-P1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAUAUUCCUUCUAUGUUUA -22
Get sequence
|
| Mature sequence | Laf-Mir-376-P1_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- GCCGUAGGGGAAAAUCCACAU -58
Get sequence
|
