MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-376-P3

Family name MIR-376 (all species)
Seed UCAUAGA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-376-P1  Laf-Mir-376-P2  Laf-Mir-376-P4  Laf-Mir-376-P5 
Orthologues Bta-Mir-376-P3  Cfa-Mir-376-P3  Cja-Mir-376-P3  Cpo-Mir-376-P3  Dno-Mir-376-P3  Eca-Mir-376-P3  Ete-Mir-376-P3  Hsa-Mir-376-P3  Mml-Mir-376-P3  Mmr-Mir-376-P3  Ocu-Mir-376-P3  Pab-Mir-376-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010036.1: 75543962-75544019 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCUAGGAUUAAAUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUCUAUGAUUACGUGUUUUAUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUUUGGAAAUAU
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Structure
        10          20        30        40        50         
CGCUAGGAUUAAAUCUU--|      U    G  A         U         CGUGUU 
                   UGGUAUU AAAA GU GAUUUUCCU CUAUGAUUA      \
                   ACUAUGA UUUU CA CUAAAAGGA GAUACUAAU      U
UAUAAAGGUUUCGUCGUAA^      C    G  C         -         UGGUAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Wh
Star sequence

Laf-Mir-376-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- GUAGAUUUUCCUUCUAUGAUUA -22
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Mature sequence

Laf-Mir-376-P3_3p

mirBase accessionNone
Sequence
37- AUCAUAGAGGAAAAUCCACGU -58
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