MirGeneDB ID | Mmr-Mir-430-P5f |
Family name |
MIR-430 (all species) |
Seed |
AGUGCCG |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
Mmr-Mir-430-P1
Mmr-Mir-430-P2
Mmr-Mir-430-P3
Mmr-Mir-430-P4
Mmr-Mir-430-P5e
Mmr-Mir-430-P6
Mmr-Mir-430-P7
|
Orthologues |
Bta-Mir-430-P5
Cja-Mir-430-P5
Cpo-Mir-430-P5
Dno-Mir-430-P5
Eca-Mir-430-P5
Ete-Mir-430-P5
Hsa-Mir-430-P5
Laf-Mir-430-P5
Mml-Mir-430-P5
Ocu-Mir-430-P5
Pab-Mir-430-P5
Xtr-Mir-430-o5f1
Xtr-Mir-430-o5f2
|
Node of Origin (locus) |
M. murinus
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007682.1: 10860566-10860624 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUCCCUAGUGGCUCCUUCCGACCUGUGGCACUCAAACUGUGGGGGCACUUUCUGUUAUGUGACGAAAGUGCCGCUACUUUUUGAGUGUUACCGAUUGAGAAAACUCGACCGGCAAAUA
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUCCCUAGUGGCUCCU- -| CCU CU G UGUUA
UC CGA GUGGCACUCAAA GUGG GGCACUUUC \
AG GUU CAUUGUGAGUUU CAUC CCGUGAAAG U
AUAAACGGCCAGCUCAAA A^ AGC UU G CAGUG
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Mmr-Mir-430-P5f_5p* (predicted) |
mirBase accession | None |
Sequence |
0- ACUCAAACUGUGGGGGCACUUUC -23
Get sequence
|
Mature sequence |
Mmr-Mir-430-P5f_3p (predicted) |
mirBase accession | None |
Sequence |
36- AAGUGCCGCUACUUUUUGAGUGU -59
Get sequence
|