| MirGeneDB ID | Neu-Mir-12316-P1-v2 |
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| Family name |
MIR-12316 (all species) |
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| Seed |
UUGAAAG |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-12316-P1-v1
Neu-Mir-12316-P2-v1
Neu-Mir-12316-P2-v2
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| Orthologues |
Mdo-Mir-12316-P1-v1
Mdo-Mir-12316-P1-v2
Sha-Mir-12316-P1-v1
Sha-Mir-12316-P1-v2
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 735787892-735787956 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUUCUUAUUCAGGUGUUGGUUGGACUAGAUGGCCUCUGAGGUUCCUUCCAACUCCGACAUUCUGUAAUUGGUUUGAAAGGGAUCAGAGGUCAUUUGGUCCAUCCCUCUGCCUCCAAACCAGACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAUUCUUAUUCAGGUGUU--| U GG - C CCGACAU
GG UGGACUAGAUGGCCUCUGA UUCCUU C AACU U
CC ACCUGGUUUACUGGAGACU AGGGAA G UUGG C
UCAGACCAAACCUCCGUCUC^ U -- A U UUAAUGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Star sequence |
Neu-Mir-12316-P1-v2_5p* |
| mirBase accession | None |
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| Sequence |
0- UGGCCUCUGAGGUUCCUUCCAACU -24
Get sequence
|
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| Mature sequence |
Neu-Mir-12316-P1-v2_3p |
| mirBase accession | None |
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| Sequence |
42- UUUGAAAGGGAUCAGAGGUCAUU -65
Get sequence
|
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