MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-12316-P1-v1

Family name MIR-12316 (all species)
Seed UGAAAGG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-12316-P1-v2  Sha-Mir-12316-P2-v1  Sha-Mir-12316-P2-v2 
Orthologues Mdo-Mir-12316-P1-v1  Mdo-Mir-12316-P1-v2  Neu-Mir-12316-P1-v1  Neu-Mir-12316-P1-v2 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL834788.1: 1303568-1303631 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUUACUCUCAGGUGUUGGUUGGACUAAGUGGCCUCUGAGGUUCCUUCCAACUCGGCAUUCUGUAUUUGGUUUGAAAGGGAUCAGAGGUCAUUUGGUCCAUCCCUCUGCCUCCAAACCAGACU
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Structure
        10          20        30        40         50        60  
CUCUUACUCUCAGGUGUU--| U                   GG      - C   UCGGCAUU 
                    GG UGGACUAAGUGGCCUCUGA  UUCCUU C AAC        \
                    CC ACCUGGUUUACUGGAGACU  AGGGAA G UUG        C
UCAGACCAAACCUCCGUCUC^ U                   --      A U   GUUUAUGU 
  120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-12316-P1-v1_5p*
mirBase accessionNone
Sequence 
0- UGGCCUCUGAGGUUCCUUCCAAC -23
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Mature sequence

Sha-Mir-12316-P1-v1_3p
mirBase accessionNone
Sequence 
42- UUGAAAGGGAUCAGAGGUCAUU -64
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