| MirGeneDB ID | Neu-Mir-12475-o1a |
|---|---|
| Family name | MIR-12475 (all species) |
| Seed | CACCUUC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-12475-o1b Neu-Mir-12475-o2 Neu-Mir-12475-o3 Neu-Mir-12475-o4 |
| Orthologues | Sha-Mir-12475-P1 |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Australidelphia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 94978259-94978318 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGCUGCAUUUUUAGCUUCUGAGGUCCCACUACACCUUCUGAAGACACAUUGUUCUGUGACUGUUCAAACAAUGUGUCUCAGAUGGGCAGUGGUGCCUUAGAAUCCUCCUCAUUUUCUUCCGet precursor sequence |
| Structure | 10 20 30 40 50 AGCUGCAUUUUUAGCUU---| UC ACA U A CUGUGA CUGAGG CCACU CC UCUGA GACACAUUGUU \ GAUUCC GGUGA GG AGACU CUGUGUAACAA C CCUUCUUUUACUCCUCCUAA^ GU CG- U - ACUUGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-12475-o1a_5p |
| mirBase accession | None |
| Sequence |
0- ACACCUUCUGAAGACACAUUGUU -23
Get sequence
|
| Star sequence | Neu-Mir-12475-o1a_3p* |
| mirBase accession | None |
| Sequence |
38- CAAUGUGUCUCAGAUGGGCAGU -60
Get sequence
|
