| MirGeneDB ID | Neu-Mir-12475-o1b |
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| Family name |
MIR-12475 (all species) |
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| Seed |
CACCUUC |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-12475-o1a
Neu-Mir-12475-o2
Neu-Mir-12475-o3
Neu-Mir-12475-o4
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| Orthologues |
Sha-Mir-12475-P1
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
Australidelphia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 94987478-94987537 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGCUGCGUUUUUAGCUUCUGAGGUCCCACUACACCUUCUGAAGACACAUUGUUCUGUGACUGUUCAAACAAUGUGUCUCAGAUGGGCAGUGGUGCCUUAGAAUCCUCCUCAUUGUCUUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCUGCGUUUUUAGCUU---| UC ACA U A CUGUGA
CUGAGG CCACU CC UCUGA GACACAUUGUU \
GAUUCC GGUGA GG AGACU CUGUGUAACAA C
CCUUCUGUUACUCCUCCUAA^ GU CG- U - ACUUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-12475-o1b_5p |
| mirBase accession | None |
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| Sequence |
0- ACACCUUCUGAAGACACAUUGUU -23
Get sequence
|
|---|
| Star sequence |
Neu-Mir-12475-o1b_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CAAUGUGUCUCAGAUGGGCAGU -60
Get sequence
|
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