| MirGeneDB ID | Neu-Mir-12475-o4 |
|---|---|
| Family name | MIR-12475 (all species) |
| Seed | CACUUCU |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-12475-o1a Neu-Mir-12475-o1b Neu-Mir-12475-o2 Neu-Mir-12475-o3 |
| Orthologues | Sha-Mir-12475-P4 |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Australidelphia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95032444-95032501 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCUGCAUUUUUAGCUGCUGAGGUCCCACUACACUUCUGAAGACACAUUGUUCUCUGACUGUUCAAACAAUGUGUCUCAGAUGGGUAAUGGUGCCUUAAAAUCCUCCUCAUUUUCUUCGet precursor sequence |
| Structure | 10 20 30 40 50 UGCUGCAUUUUUAGCUGC--| UC C ACU A CUCUGA UGAGG CCA UAC UCUGA GACACAUUGUU \ AUUCC GGU AUG AGACU CUGUGUAACAA C CUUCUUUUACUCCUCCUAAA^ GU A GGU - ACUUGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-12475-o4_5p |
| mirBase accession | None |
| Sequence |
0- ACACUUCUGAAGACACAUUGUUC -23
Get sequence
|
| Star sequence | Neu-Mir-12475-o4_3p* |
| mirBase accession | None |
| Sequence |
36- ACAAUGUGUCUCAGAUGGGUAA -58
Get sequence
|
