| MirGeneDB ID | Neu-Mir-12475-o4 |
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| Family name |
MIR-12475 (all species) |
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| Seed |
CACUUCU |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-12475-o1a
Neu-Mir-12475-o1b
Neu-Mir-12475-o2
Neu-Mir-12475-o3
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| Orthologues |
Sha-Mir-12475-P4
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
Australidelphia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95032444-95032501 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCUGCAUUUUUAGCUGCUGAGGUCCCACUACACUUCUGAAGACACAUUGUUCUCUGACUGUUCAAACAAUGUGUCUCAGAUGGGUAAUGGUGCCUUAAAAUCCUCCUCAUUUUCUUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGCUGCAUUUUUAGCUGC--| UC C ACU A CUCUGA
UGAGG CCA UAC UCUGA GACACAUUGUU \
AUUCC GGU AUG AGACU CUGUGUAACAA C
CUUCUUUUACUCCUCCUAAA^ GU A GGU - ACUUGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-12475-o4_5p |
| mirBase accession | None |
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| Sequence |
0- ACACUUCUGAAGACACAUUGUUC -23
Get sequence
|
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| Star sequence |
Neu-Mir-12475-o4_3p* |
| mirBase accession | None |
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| Sequence |
36- ACAAUGUGUCUCAGAUGGGUAA -58
Get sequence
|
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