| MirGeneDB ID | Neu-Mir-12475-o3 |
|---|
| Family name |
MIR-12475 (all species) |
|---|
| Seed |
CGUCGUU |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Neu-Mir-12475-o1a
Neu-Mir-12475-o1b
Neu-Mir-12475-o2
Neu-Mir-12475-o4
|
|---|
| Orthologues |
Sha-Mir-12475-P3
|
|---|
| Node of Origin (locus) |
N. eugenii
|
|---|
| Node of Origin (family) |
Australidelphia
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 94990246-94990306 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGCUGCAUUUUGAAGUGCUGAGGUACCACUCGUCGUUCUGGGGAUGCAUUGUUGCGUGACUGUUGAAACAGUGCGUCUCAGAUCGGGAGUUGUCCCUCAGAAUCCUCAUCAUGUUCUUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGGCUGCAUUUUGAAGUG--| U C G U G GCGUGA
CUGAGG AC ACUC UCG UCUGGG AUGCAUUGUU \
GACUCC UG UGAG GGC AGACUC UGCGUGACAA C
CCUUCUUGUACUACUCCUAA^ C U - U - AGUUGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Neu-Mir-12475-o3_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCGUCGUUCUGGGGAUGCAUUGUU -24
Get sequence
|
|---|
| Star sequence |
Neu-Mir-12475-o3_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- CAGUGCGUCUCAGAUCGGGAGU -61
Get sequence
|
|---|
