| MirGeneDB ID | Neu-Mir-12475-o2 |
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| Family name |
MIR-12475 (all species) |
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| Seed |
UCCAUUC |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-12475-o1a
Neu-Mir-12475-o1b
Neu-Mir-12475-o3
Neu-Mir-12475-o4
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| Orthologues |
Sha-Mir-12475-P2a
Sha-Mir-12475-P2b
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
Australidelphia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95012989-95013048 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGCUGCAUUUUGAGCUGCUGAGGUCCCACUAUCCAUUCUGAUGAUACACUGUUCUGUGACUUUUCAAACAGUGUAUCUCAGAUUGGGAGUGGUCCCUUGGAAUCCUCAUCAUCUCCUUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGCUGCAUUUUGAGCUG---|UG UC A U U CUGUGA
C AGG CCACU UCCA UCUGA GAUACACUGUU \
G UCC GGUGA GGGU AGACU CUAUGUGACAA C
GGUUCCUCUACUACUCCUAA^GU CU - U - ACUUUU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-12475-o2_5p |
| mirBase accession | None |
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| Sequence |
0- AUCCAUUCUGAUGAUACACUGUU -23
Get sequence
|
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| Star sequence |
Neu-Mir-12475-o2_3p* |
| mirBase accession | None |
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| Sequence |
38- CAGUGUAUCUCAGAUUGGGAGU -60
Get sequence
|
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