| MirGeneDB ID | Neu-Mir-12475-o2 |
|---|---|
| Family name | MIR-12475 (all species) |
| Seed | UCCAUUC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-12475-o1a Neu-Mir-12475-o1b Neu-Mir-12475-o3 Neu-Mir-12475-o4 |
| Orthologues | Sha-Mir-12475-P2a Sha-Mir-12475-P2b |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Australidelphia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95012989-95013048 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCUGCAUUUUGAGCUGCUGAGGUCCCACUAUCCAUUCUGAUGAUACACUGUUCUGUGACUUUUCAAACAGUGUAUCUCAGAUUGGGAGUGGUCCCUUGGAAUCCUCAUCAUCUCCUUGGGet precursor sequence |
| Structure | 10 20 30 40 50 GGCUGCAUUUUGAGCUG---|UG UC A U U CUGUGA C AGG CCACU UCCA UCUGA GAUACACUGUU \ G UCC GGUGA GGGU AGACU CUAUGUGACAA C GGUUCCUCUACUACUCCUAA^GU CU - U - ACUUUU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-12475-o2_5p |
| mirBase accession | None |
| Sequence |
0- AUCCAUUCUGAUGAUACACUGUU -23
Get sequence
|
| Star sequence | Neu-Mir-12475-o2_3p* |
| mirBase accession | None |
| Sequence |
38- CAGUGUAUCUCAGAUUGGGAGU -60
Get sequence
|
