MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-1984-P3

Family name MIR-1984 (all species)
Seed GCCCUAU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-1984-P4 
Orthologues Esc-Mir-1984  Lhy-Mir-1984  Npo-Mir-1984  Ovu-Mir-1984-P3 
Node of Origin (locus) Octopus
Node of Origin (family) Conchifera
Genome context
(PRJNA270931_OBI)
KQ422643: 240921-240979 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGACUUAUAUUGUUUUAAGGUUGGUUAUUUGCCCUAUACCUCAGUCGCUGUGUUAAUGUAACCUCAGCGUCUGAUGUCGUAAGGCACGUUAACAACUGUCACACGUCGAAUGUCGCCA
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Structure
        10          20        30         40        50        
GAGACUUAUAUUGUUUUAA--     GUU  U    C   -| C    U     UGUUAA 
                     GGUUG   AU UGCC UAU AC UCAG CGCUG      U
                     UCAAC   UG ACGG AUG UG AGUC GCGAC      G
ACCGCUGUAAGCUGCACACUG     AAU  C    A   C^ U    U     UCCAAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Mir-1984-P3_5p

mirBase accessionNone
Sequence
0- UGCCCUAUACCUCAGUCGCUGU -22
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Star sequence

Obi-Mir-1984-P3_3p*

mirBase accessionNone
Sequence
36- AGCGUCUGAUGUCGUAAGGCACG -59
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