MirGeneDB 3.0
MirGeneDB ID

Obi-Mir-1984-P4

Family name MIR-1984 (all species)
Seed GCCCUAU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-1984-P3 
Orthologues Esc-Mir-1984  Lhy-Mir-1984  Npo-Mir-1984  Ovu-Mir-1984-P4 
Node of Origin (locus) Octopus
Node of Origin (family) Conchifera
Genome context
(PRJNA270931_OBI)		 KQ422643: 90945-91004 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUUAUCGUUGUUACGGGUUUUUAUCAACUGCCCUAUACCCCAGUCACUGAGUGAUCAUUACUAUCAGUGACAAAGGUAUAGAGGUAGUUGAAUAUUACCGACGUCAACGGAGAUUAUC
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Structure
        10          20        30         40        50         
UUGUUAUCGUUGUUACG--   UUUUA         -|      CCA        GUGAUC 
                   GGU     UCAACUGCC CUAUACC   GUCACUGA      \
                   CCA     AGUUGAUGG GAUAUGG   CAGUGACU      A
CUAUUAGAGGCAACUGCAG   UUAUA         A^      AAA        AUCAUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Obi-Mir-1984-P4_5p
mirBase accessionNone
Sequence 
0- UGCCCUAUACCCCAGUCACUGA -22
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Star sequence

Obi-Mir-1984-P4_3p*
mirBase accessionNone
Sequence 
37- AGUGACAAAGGUAUAGAGGUAGU -60
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