MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-1984

Family name MIR-1984 (all species)
Seed GCCCUAU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Hru-Mir-1984-P1  Hru-Mir-1984-P2  Lgi-Mir-1984-P1  Lgi-Mir-1984-P2  Lhy-Mir-1984  Mgi-Mir-1984-P1  Mgi-Mir-1984-P2  Npo-Mir-1984  Obi-Mir-1984-P3  Obi-Mir-1984-P4  Ovu-Mir-1984-P3  Ovu-Mir-1984-P4  Pve-Mir-1984-P1  Pve-Mir-1984-P2  Rph-Mir-1984-P1  Rph-Mir-1984-P2 
Node of Origin (locus) Conchifera
Node of Origin (family) Conchifera
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-1984_pre_SRIE01015988.1:88490-88628: 39-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGCAUUCUGCCAUUUGAGUUGUUCAUUUGCCCUAUACCUCAGUCGCGGUGUUUUAAUUUGAAAUCACAGCGUCUGAUGUAUCGAGGCACCUCGGUAGCUCAGUGACAUCAGGCAAUGCAC
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Structure
        10          20        30         40        50        60
UUUUGCAUUCUGCCAUU--       UUCAUU    CU-|   C    U   G   UUUUAA 
                   UGAGUUG      UGCC   AUAC UCAG CGC GUG      U
                   ACUCGAU      ACGG   UAUG AGUC GCG CAC      U
CACGUAACGGACUACAGUG       GGCUCC    AGC^   U    U   A   UAAAGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li
Mature sequence

Esc-Mir-1984_5p
mirBase accessionNone
Sequence 
0- UGCCCUAUACCUCAGUCGCGGUG -23
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Star sequence

Esc-Mir-1984_3p*
mirBase accessionNone
Sequence 
39- CAGCGUCUGAUGUAUCGAGGCACC -63
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