MirGeneDB 3.0
MirGeneDB ID

Pau-Mir-281-P22

Family name MIR-281 (all species)
Seed GUCAUGG
Species Horseshoe worm (Phoronis australis)
MiRBase ID
Paralogues Pau-Mir-281-P23 
Orthologues Aae-Mir-281  Aga-Mir-281  Agr-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bko-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dgr-Mir-281  Dlo-Mir-281  Dma-Mir-281  Dpu-Mir-281  Eba-Mir-281  Ebu-Mir-281  Egr-Mir-281  Esc-Mir-281  Gsa-Mir-281  Hme-Mir-281  Hru-Mir-281  Isc-Mir-281  Lhy-Mir-281  Llo-Mir-281  Mgi-Mir-281  Mom-Mir-281  Npo-Mir-281  Obi-Mir-281  Ofu-Mir-281  Ovu-Mir-281  Pca-Mir-281  Pcr-Mir-281  Pdu-Mir-281  Pfl-Mir-281  Rph-Mir-281  Sko-Mir-281  Sma-Mir-281  Sme-Mir-281  Snu-Mir-281  Sto-Mir-281  Tca-Mir-281  Tur-Mir-281  War-Mir-281 
Node of Origin (locus) P. australis
Node of Origin (family) Nephrozoa
Genome context
(Phoronis_australis_GCA_002633005)		 NMRA01000562.1: 157303-157360 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGAGAAACAGAGAGGCAUGGCCGGAAAUAAAGGGAGCUGGUCCAGGGCCGUCUAUUAUUUGGCACUGUCAUGGAGUUACUCUCUUUAUUAAACUGGUUUCAAUAUCCUUCACUUACA
Get precursor sequence
Structure
        10        20          30        40         50        
ACGAGAAACAGAGAGGCAU      A--|          C   -    G   C  CUAUU 
                   GGCCGG   AAUAAAGGGAG UGG UCCA GGC GU     A
                   UUGGUC   UUAUUUCUCUC AUU AGGU CUG CA     U
ACAUUCACUUCCUAUAACU      AAA^          -   G    A   U  CGGUU 
      110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Pau-Mir-281-P22_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAGGGAGCUGGUCCAGGGCCGU -22
Get sequence
Mature sequence

Pau-Mir-281-P22_3p (predicted)
mirBase accessionNone
Sequence 
36- UGUCAUGGAGUUACUCUCUUUA -58
Get sequence