MirGeneDB 2.1

MirGeneDB ID

Pfl-Mir-210-P7b

Family name MIR-210 (all species)
Seed UGUGCGU
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-210-P7a 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xtr-Mir-210 
Node of Origin (locus) P. flava
Node of Origin (family) Bilateria
Genome context
(Pfl)
LD347622.1: 60060-60120 [-]
Precursor
(pre-Mir +30nt flank)
AUGCGAGCACAGUUUACAGAACAGGAAGGAAGCCGCUGCCACAUUGCACAGCAGUGCAGUCGAGAAUUGUUGUGCGUGCGACAGCGACUUCCGUCCUUCUGCAAAAUACAAAUUCCAGAUU
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Structure
        10            20        30        40        50        60
AUGCGAGCACAGUUUAC----|  AC    A     C     CCA   U        GUGCAG 
                     AGA  AGGA GGAAG CGCUG   CAU GCACAGCA      U
                     UCU  UCCU CCUUC GCGAC   GUG CGUGUUGU      C
UUAGACCUUAAACAUAAAACG^  --    G     A     AGC   -        UAAGAG 
 .       110       100          90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Star sequence

Pfl-Mir-210-P7b_5p*

mirBase accessionNone
Sequence
0- AGCCGCUGCCACAUUGCACAGCA -23
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Mature sequence

Pfl-Mir-210-P7b_3p

mirBase accessionNone
Sequence
39- UUGUGCGUGCGACAGCGACUUC -61
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