MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-29-P2r

Family name MIR-29 (all species)
Seed AGCACCA
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues Snu-Mir-29-P1  Snu-Mir-29-P2q 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dpu-Mir-29-P2  Eba-Mir-29-P2  Esc-Mir-29-P2  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) S. nudus
Node of Origin (family) Bilateria
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049312.1: 13486724-13486781 [+]
Precursor
(pre-Mir +30nt flank)
AAGAAAGCGAUAAAAUUGUUGCAAGGAGCCCCUGGCAUCUUCCGGUGAAUUGUGGCCACAUACAACAAGCACCAGUAGAUAUCAGGGAUGACUUGCAACUCUGCAUCUUACUGUAGUG
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Structure
        10          20        30        40        50         
AAGAAAGCGAUAAAAUU--|       GAGC     GC    UCC    AA    GGCCA 
                   GUUGCAAG    CCCUG  AUCU   GGUG  UUGU     \
                   CAACGUUC    GGGAC  UAGA   CCAC  AACA     C
GUGAUGUCAUUCUACGUCU^       AGUA     UA    UGA    G-    ACAUA 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Snu-Mir-29-P2r_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUGGCAUCUUCCGGUGAAUUGU -23
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Mature sequence

Snu-Mir-29-P2r_3p
mirBase accessionNone
Sequence 
36- AAGCACCAGUAGAUAUCAGGGA -58
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