MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-19-P1c

Family name MIR-19 (all species)
Seed GUGCAAA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-19-P1a-v1  Sto-Mir-19-P1a-v2  Sto-Mir-19-P2a  Sto-Mir-19-P2b  Sto-Mir-19-P2c 
Orthologues Cmi-Mir-19-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01013767.1: 4765-4822 [+]
Precursor
(pre-Mir +30nt flank)
GCCUCUUUGAUACUCAUGCAUCUUUCUACCAGUUUUGCUGUUUUGUAUUACAGGAGGAAAUUACCUGUGCAAAUCGAUGCAAAACUAAUAGGGAACUGUACUGCUAGUUGACUCUUAC
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Structure
        10          20        30        40          50         
GCCUCUUUGAUACUCAU--   UC UU   CC        UGU--|    AUU     AGGA 
                   GCA  U  CUA  AGUUUUGC     UUUGU   ACAGG    \
                   UGU  A  GAU  UCAAAACG     AAACG   UGUCC    A
CAUUCUCAGUUGAUCGUCA   CA GG   AA        UAGCU^    ---     AUUA 
      110       100        90        80        70           60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Sto-Mir-19-P1c_5p*
mirBase accessionNone
Sequence 
0- AGUUUUGCUGUUUUGUAUUACAGG -24
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Mature sequence

Sto-Mir-19-P1c_3p
mirBase accessionNone
Sequence 
35- UGUGCAAAUCGAUGCAAAACUAA -58
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