MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-19-P2c

Family name MIR-19 (all species)
Seed GUGCAAA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-19-P1a-v1  Sto-Mir-19-P1a-v2  Sto-Mir-19-P1c  Sto-Mir-19-P2a  Sto-Mir-19-P2b 
Orthologues Aca-Mir-19-P2c  Ami-Mir-19-P2c  Bta-Mir-19-P2c  Cfa-Mir-19-P2c  Cja-Mir-19-P2c  Cli-Mir-19-P2c  Cmi-Mir-19-P2c  Cpi-Mir-19-P2c  Cpo-Mir-19-P2c  Dno-Mir-19-P2c  Dre-Mir-19-P2c  Eca-Mir-19-P2c  Ete-Mir-19-P2c  Gga-Mir-19-P2c  Gja-Mir-19-P2c  Gmo-Mir-19-P2c  Hsa-Mir-19-P2c  Laf-Mir-19-P2c  Lch-Mir-19-P2c  Mdo-Mir-19-P2c  Mml-Mir-19-P2c  Mmr-Mir-19-P2c  Mmu-Mir-19-P2c  Mun-Mir-19-P2c  Neu-Mir-19-P2c  Oan-Mir-19-P2c  Ocu-Mir-19-P2c  Pab-Mir-19-P2c  Pbv-Mir-19-P2c  Rno-Mir-19-P2c  Sha-Mir-19-P2c  Spt-Mir-19-P2c  Tgu-Mir-19-P2c  Xla-Mir-19-P2c3  Xla-Mir-19-P2c4  Xtr-Mir-19-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01013767.1: 5089-5150 [+]
Precursor
(pre-Mir +30nt flank)
GGAAAUCUUCAUGAGGUACUGUUAACAGUUAGUUUUGCAGGUUUGCAUUCAGCUGAUAUGUGCUGAUGCUGUGCAAAUCCAUGCAAAACUGACAGUAGCAGUGGUUUCUAGAGAAUUGAAUG
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Structure
        10           20        30         40         50        60
GGAAAUCUUCAUGAGGU---       ACA            -  -|     UU    UGAUAU 
                    ACUGUUA   GUUAGUUUUGCA GG UUUGCA  CAGC      G
                    UGACGAU   CAGUCAAAACGU CC AAACGU  GUCG      U
GUAAGUUAAGAGAUCUUUGG       GA-            A  U^     --    UAGUCG 
120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Sto-Mir-19-P2c_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUUUGCAUUCAGC -23
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Mature sequence

Sto-Mir-19-P2c_3p
mirBase accessionNone
Sequence 
39- UGUGCAAAUCCAUGCAAAACUGA -62
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